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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc03225.1.g00090.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 188aa MW: 21021.9 Da PI: 7.7088 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc03225.1.g00090.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 82.8 | 3.2e-26 | 67 | 168 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHH CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkan 72
f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++g++W++++i+r++++r++lt+GW+ Fv+a+
Zmw_sc03225.1.g00090.1.es.mkhc 67 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVNAK 143
99*****************************8544444..48************************************* PP
T--TT-EEEEEE-SSSEE..EEEEE-S CS
B3 73 gLkegDfvvFkldgrsefelvvkvfrk 99
+L +gD+v+F ++++ +l+++++r+
Zmw_sc03225.1.g00090.1.es.mkhc 144 RLVAGDSVLFA--WNENNQLLLGIRRA 168
***********..7888889****997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 188 aa
Download sequence Send
to blast |
MEAQIPNYPS LPPQLICQLH NVTMHADAET DEVYAQMTLQ PLSPQELKDS FLPADLGTTS 60 KQPTNYFCKT LTASDTSTHG GFSVPRRAAE KVFPPLDFSQ QPPAQELIAK DLHGNEWKFR 120 HIFRGQPKRH LLTTGWSVFV NAKRLVAGDS VLFAWNENNQ LLLGIRRANR PQTVMPSSVL 180 SSDSMHIG
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Functional Description ? help
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Source |
Description |
UniProt | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). |
UniProt | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). |