PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc03192.1.g00080.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 652aa MW: 67719.2 Da PI: 8.3388

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc03192.1.g00080.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	38.2	3e-12	213	241	1	29
---SS-EEEEEEE--TT-SS-EEEEEE-S CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCts 29 ++Dg++WrKYGqK kg+++pr+YYr + Zmw_sc03192.1.g00080.1.am.mk 213 MNDGCQWRKYGQKISKGNPCPRAYYRFSA 241 58************************775 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	9.9E-13	198	241	IPR003657	WRKY domain
SuperFamily	SSF118290	9.81E-11	206	239	IPR003657	WRKY domain
PROSITE profile	PS50811	15.778	208	348	IPR003657	WRKY domain
SMART	SM00774	2.4E-7	213	347	IPR003657	WRKY domain
Pfam	PF03106	3.8E-10	214	242	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	3.8E-5	323	346	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 652 aa Download sequence Send to blast
MSKGEEQLGS HDEQLKDEVQ VQEDKLASTR AEMDEVREEN ERLKKMLSRI AEDYRSLQMN 60 FQEVIQQEQA KKPVDPMATS RTNNEEPGFI SLSLRTSTSM NKKEEKSSIL LEGKGREELT 120 TIKESGLSLG LTDCKVGAAS SGKIQPNVLT LSPEGSSEDA TDDGIETTDQ WPSSKTQKNL 180 RSDGAEVEDD LGPLPPVKKA RVSVRARCDA PTMNDGCQWR KYGQKISKGN PCPRAYYRFS 240 ASPWGARPRA GPIRRRTPMR KSAPAARAGA GEAVPALRRL GLPERASSAL VGWSFHATAV 300 DNLDGPWNVG VVGVLESQPM RLRAVQRCAE DMSILITTYE GTHNHPLSAS ATAMASTTSA 360 AASMLMSGSS ASLPSLGFPS PGSRPASAAT AAGLSFGFPP AADTSKQPFF LLAGAAASVT 420 STSSNPTITL DLTSPAASSQ AFSLSNRFSS SYGHGTSRYP STSFSFSGSG PSALSSAAWP 480 AAGAGYLSYG PPAASSYSGG KLGPFEASLS SISTGRPGGE GSYLYQQQKA SASGTAPAGV 540 LTDTIAKAIT SDPGFQTALA AAITSYVGNR GGGSSAGSDS GILPGLHLGL GPSPPSTTTT 600 CSSALLARSS STSTAVAPAQ SSSGRVFLQP SLGLSGTHSA SSSPVENREH IS

Sequence ? help Back to Top

Protein Sequence Length: 652 aa Download sequence Send to blast

MSKGEEQLGS HDEQLKDEVQ VQEDKLASTR AEMDEVREEN ERLKKMLSRI AEDYRSLQMN  60
FQEVIQQEQA KKPVDPMATS RTNNEEPGFI SLSLRTSTSM NKKEEKSSIL LEGKGREELT  120
TIKESGLSLG LTDCKVGAAS SGKIQPNVLT LSPEGSSEDA TDDGIETTDQ WPSSKTQKNL  180
RSDGAEVEDD LGPLPPVKKA RVSVRARCDA PTMNDGCQWR KYGQKISKGN PCPRAYYRFS  240
ASPWGARPRA GPIRRRTPMR KSAPAARAGA GEAVPALRRL GLPERASSAL VGWSFHATAV  300
DNLDGPWNVG VVGVLESQPM RLRAVQRCAE DMSILITTYE GTHNHPLSAS ATAMASTTSA  360
AASMLMSGSS ASLPSLGFPS PGSRPASAAT AAGLSFGFPP AADTSKQPFF LLAGAAASVT  420
STSSNPTITL DLTSPAASSQ AFSLSNRFSS SYGHGTSRYP STSFSFSGSG PSALSSAAWP  480
AAGAGYLSYG PPAASSYSGG KLGPFEASLS SISTGRPGGE GSYLYQQQKA SASGTAPAGV  540
LTDTIAKAIT SDPGFQTALA AAITSYVGNR GGGSSAGSDS GILPGLHLGL GPSPPSTTTT  600
CSSALLARSS STSTAVAPAQ SSSGRVFLQP SLGLSGTHSA SSSPVENREH IS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004964541.1	1e-106	probable WRKY transcription factor 72
TrEMBL	A0A368QQA3	1e-105	A0A368QQA3_SETIT; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5047	38	62