 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Zmw_sc03183.1.g00010.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 352aa MW: 38858.9 Da PI: 5.4622 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc03183.1.g00010.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.4e-19 | 120 | 173 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++ ++q+++Le++F +++++ e+++++A+ l+L rqV vWFqNrRa++k
Zmw_sc03183.1.g00010.1.am.mk 120 KKRRLAADQVRALERCFDADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWK 173
4557899**********************************************9 PP
|
| 2 | HD-ZIP_I/II | 124.1 | 6.6e-40 | 119 | 211 | 1 | 93 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81
ekkrrl+++qv++LE++F++++kL+perK+++ar+L+l+prqvavWFqnrRAR+ktkq+E+d+++L++++dal++e ++L+
Zmw_sc03183.1.g00010.1.am.mk 119 EKKRRLAADQVRALERCFDADNKLDPERKARIARDLRLHPRQVAVWFQNRRARWKTKQIERDFNSLRARHDALRHECDELR 199
69******************************************************************************* PP
HD-ZIP_I/II 82 keveeLreelke 93
+++++L++e++e
Zmw_sc03183.1.g00010.1.am.mk 200 RDKDALAAEIRE 211
*******99986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
PASLSAPGIH LSTEFHVQLL HHTPLPQVGV GSAAALSLHP SLPRPFLSQE LSTMKRPSCR 60
GFSSVASQEA QEQREDSSRS MEQGLDVHAK RDDAVAGAYD EEEEEDEDEL VGGRGGLGEK 120
KRRLAADQVR ALERCFDADN KLDPERKARI ARDLRLHPRQ VAVWFQNRRA RWKTKQIERD 180
FNSLRARHDA LRHECDELRR DKDALAAEIR ELREKVEKQM SIRELREKVE KQMSVKLESA 240
EDRLLPGSVA AATAVHKDGS TDSDSSAVFN EEASPYSGGA AFDHHPSFTG FTSSFLAPSS 300
TLSSSFPFMY SGGPHLDQEA DGFLGAVATA DSFFAAEEQG TGLGSWYGGE GW
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 167 | 175 | RRARWKTKQ |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor. {ECO:0000250}. |
