PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02952.1.g00140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 539aa MW: 59270.2 Da PI: 10.7121 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45.6 | 1.8e-14 | 280 | 324 | 1 | 49 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 + +kGVr++ grWv+e+r+p g ++r++lg+f tae+Aa+a++ Zmw_sc02952.1.g00140.1.am.mk 280 PVFKGVRRRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDIR 324 579****887.9******9996..33.5******************975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 4.6E-10 | 280 | 327 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.9E-13 | 281 | 337 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.7E-20 | 281 | 324 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 16.436 | 281 | 344 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.92E-14 | 281 | 325 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 6.31E-18 | 282 | 322 | No hit | No description |
PRINTS | PR00367 | 3.7E-7 | 282 | 293 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-7 | 304 | 320 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 539 aa Download sequence Send to blast |
MLARACVVFQ QWHVESAERW GAQQQVAVSG EEKEWNTYWS ERARRKRAVR ATENAMGRES 60 TRGKEERERA GVCARLDTEL TGKPLESGTG AGDTARRRPV TVGHLEHQRP ELLLRAVAVQ 120 QSPPSRKRTP ALKARPMPPR CARPHRPPRP RELQLFPTQL RPASPNPSPP SSVPDPSQVA 180 LPGWRLPCRT ALEQGTRPRR TPRGKLYNPA TFPSQIQTTP SSLASLAAPT LHSTHQIAMD 240 VGAFSSDYSS GTPSPSYMTV SSAPPKRRAG RTKFKETRHP VFKGVRRRNP GRWVCEVREP 300 HGKQRIWLGT FETAEMAARA HDIRRAAAEA AEQFRPALDQ GNVAVEETIT TMPDLFSSES 360 TQSADHHPYC MVDDRFDFGM QGYLDMAQGM LIDPPPMGGS SSGNGGDDND GGEELSSLLT 420 PSMAAGAPSI MRSRVPLEFR VATRCLRSRP TKIVRQLMAS SSASSFTKSS RGFAPPLQER 480 GVSFHSVSGS SPLRVRERLV LIIHTVTSCS LSPALCTPLL QGLEVLVSPH TPFSALEQQ |