PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02952.1.g00140.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 539aa    MW: 59270.2 Da    PI: 10.7121
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02952.1.g00140.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.61.8e-14280324149
                           AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 
                                   + +kGVr++   grWv+e+r+p   g ++r++lg+f tae+Aa+a++  
  Zmw_sc02952.1.g00140.1.am.mk 280 PVFKGVRRRN-PGRWVCEVREP--HG-KQRIWLGTFETAEMAARAHDIR 324
                                   579****887.9******9996..33.5******************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.6E-10280327IPR001471AP2/ERF domain
SMARTSM003801.9E-13281337IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-20281324IPR001471AP2/ERF domain
PROSITE profilePS5103216.436281344IPR001471AP2/ERF domain
SuperFamilySSF541713.92E-14281325IPR016177DNA-binding domain
CDDcd000186.31E-18282322No hitNo description
PRINTSPR003673.7E-7282293IPR001471AP2/ERF domain
PRINTSPR003673.7E-7304320IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MLARACVVFQ QWHVESAERW GAQQQVAVSG EEKEWNTYWS ERARRKRAVR ATENAMGRES  60
TRGKEERERA GVCARLDTEL TGKPLESGTG AGDTARRRPV TVGHLEHQRP ELLLRAVAVQ  120
QSPPSRKRTP ALKARPMPPR CARPHRPPRP RELQLFPTQL RPASPNPSPP SSVPDPSQVA  180
LPGWRLPCRT ALEQGTRPRR TPRGKLYNPA TFPSQIQTTP SSLASLAAPT LHSTHQIAMD  240
VGAFSSDYSS GTPSPSYMTV SSAPPKRRAG RTKFKETRHP VFKGVRRRNP GRWVCEVREP  300
HGKQRIWLGT FETAEMAARA HDIRRAAAEA AEQFRPALDQ GNVAVEETIT TMPDLFSSES  360
TQSADHHPYC MVDDRFDFGM QGYLDMAQGM LIDPPPMGGS SSGNGGDDND GGEELSSLLT  420
PSMAAGAPSI MRSRVPLEFR VATRCLRSRP TKIVRQLMAS SSASSFTKSS RGFAPPLQER  480
GVSFHSVSGS SPLRVRERLV LIIHTVTSCS LSPALCTPLL QGLEVLVSPH TPFSALEQQ