PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02842.1.g00040.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 277aa    MW: 30462.9 Da    PI: 6.2326
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02842.1.g00040.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY67.71.8e-2179141259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 
                                   +Dgy+WrKYG K+++g++f+rsY+rCt++   gC ++k v++++  +d+ ++++tY+++H+++
  Zmw_sc02842.1.g00040.1.am.mk  79 EDGYQWRKYGEKSINGTHFTRSYFRCTYKgdkGCLATKYVQQQNdsSDTPMFKVTYNNDHTCN 141
                                   8***************************99999*******9875226899***********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182906.15E-2172142IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.5E-2273141IPR003657WRKY domain
SMARTSM007741.1E-2978142IPR003657WRKY domain
PROSITE profilePS5081116.86879143IPR003657WRKY domain
PfamPF031066.0E-2379140IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    Send to blast
MAWLPDYLEP AVREVAHVSE LIKTHQPLLL LHLQGQTAQP LAQTDSKGSA RSGKRRRPAA  60
NEGGGKTKSW AILTTVPHED GYQWRKYGEK SINGTHFTRS YFRCTYKGDK GCLATKYVQQ  120
QNDSSDTPMF KVTYNNDHTC NCTAGSPSSA KNNINNIPVA GGAAASNYPP TGGHHDFMVT  180
EQEITAVVPP PLADGSAGVR LDEQMPCAHQ ERLAITDRYD VTVGAVGESS RLPGVSSNEL  240
DRQIVTEPMM GDYDQELQDD LELLFLRDNF CYRSTTG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025805829.15e-47WRKY transcription factor 55-like
STRINGPavir.Ca00178.1.p6e-40(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP50452663