PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02793.1.g00040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | Trihelix | ||||||||
Protein Properties | Length: 350aa MW: 38247.6 Da PI: 7.79 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 42.9 | 1.3e-13 | 24 | 101 | 6 | 86 |
trihelix 6 evlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyf 82 + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g++++pk qCk++++ l+k+yk +k+ ++ ++ yf Zmw_sc02793.1.g00040.1.am.mk 24 XTSALIDAWGERFVALGRGSLRHPQWQEVAEVVsSRDGYSKTPKsdaQCKNRIDTLKKKYKVEKAKHNS-------SWTYF 97 689******************************878899988765559**************9998886.......5**** PP trihelix 83 dqle 86 ++l+ Zmw_sc02793.1.g00040.1.am.mk 98 HRLD 101 **98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 5.5E-20 | 22 | 103 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 350 aa Download sequence Send to blast |
MGDDAVASPS PSPSPSPLPV ADXXTSALID AWGERFVALG RGSLRHPQWQ EVAEVVSSRD 60 GYSKTPKSDA QCKNRIDTLK KKYKVEKAKH NSSWTYFHRL DELLAPIYKP GSGSSSGARS 120 APPMVPPRFS FPQRTRTPLQ PSAVAKRRIP SPPTQPSSSS GSSDGFPPEP PSATVANGKK 180 PRVEEPAPAN GAESNNRAQS LRELAQAIRR FGEVYERIES SKREQELRME RERLEAAREL 240 EDQRVQFFLK MQMELSKATD GAPSATPMAA ATAIDGNGSR RAAMATDVAT SSNHKVRYRS 300 MDSRHPHTAQ QPQYQHSQNN SGAAAPASGN GSDTENKEDE DMEDEDEDSQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025815450.1 | 1e-136 | trihelix transcription factor ASIL2-like | ||||
TrEMBL | A0A0E0K1B1 | 1e-139 | A0A0E0K1B1_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC02G18950.1 | 1e-140 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2404 | 30 | 69 |