PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02759.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 306aa MW: 33246 Da PI: 4.4862 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 129 | 180 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr+++ +g++vAeIrdp+ +g r++lg+++ + +Aa+a+++a+ +++g+ Zmw_sc02759.1.g00120.1.sm.mk 129 KYRGVRQRP-WGKYVAEIRDPKRRG--SRVWLGTYDLPIDAARAYDRAAFRMRGA 180 8********.**********96554..**************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 6.80E-19 | 129 | 188 | No hit | No description |
Pfam | PF00847 | 7.2E-14 | 129 | 179 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-31 | 129 | 188 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.998 | 129 | 187 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 6.5E-35 | 129 | 193 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.63E-21 | 129 | 188 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 1.5E-13 | 130 | 141 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.5E-13 | 169 | 189 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MDFTGDGDDF VLNFISEHFL RNEDGFPEAG WVVSSNPSFP VQPPPAAEPA FEPMPFLPQQ 60 QQQPERYVDM THDHTGAAPA AAVAAEAFRV AQEPAPQPVM ITLESEPFSP ASSHEWAASA 120 PAPVEDFHKY RGVRQRPWGK YVAEIRDPKR RGSRVWLGTY DLPIDAARAY DRAAFRMRGA 180 KAILNFPNEV GTRGADLLAS TPASAKKRKL QQVDPDVEVV TVVNKAPSAD EVPSWTSTPL 240 SSTSSSSCIF TCQTTEIVSS TVSSTETTLV GDGADGFPGT PSSWSWEELL CGLSPHPPLL 300 DVVDYS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 3e-25 | 130 | 192 | 6 | 68 | ATERF1 |
3gcc_A | 3e-25 | 130 | 192 | 6 | 68 | ATERF1 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021319358.1 | 2e-72 | ethylene-responsive transcription factor ERF105 | ||||
TrEMBL | A0A1B6PMF0 | 5e-71 | A0A1B6PMF0_SORBI; Uncharacterized protein | ||||
STRING | GRMZM5G805505_P01 | 4e-71 | (Zea mays) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP103 | 37 | 465 |