PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02759.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 729aa    MW: 79409.8 Da    PI: 10.7081
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02759.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-18283333255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t+ +Aa+a+++a+  ++g
  Zmw_sc02759.1.g00110.1.am.mk 283 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVDAARAYDRAAFGMRG 333
                                   8********.**********96554..**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-31282342IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-21283342IPR016177DNA-binding domain
CDDcd000188.02E-17283342No hitNo description
PROSITE profilePS5103223.472283341IPR001471AP2/ERF domain
SMARTSM003803.1E-35283347IPR001471AP2/ERF domain
PfamPF008473.6E-12283333IPR001471AP2/ERF domain
PRINTSPR003672.5E-12284295IPR001471AP2/ERF domain
PRINTSPR003672.5E-12323343IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 729 aa     Download sequence    Send to blast
MATDSSRLSL RRTSPVQLLQ VVARSAHRHG VKAGEMNRSA IRQLHGLQAT SSAHRLYVRA  60
SSRPLACRRR SSSNIISHDP GARSILCSSD EREIFAKART LDTSLLPVRT RVPVSRPHGF  120
CRLILACARD QERPPELYSD MDFTGDADNF ALDFGLIREH LLGGSSGVPE ASPVVSGDAS  180
FIVQAPHSAE LCQSMAFLPQ QQHFEYIDMK HEYMGSAAPA VSGCEAAFSF RAAQEPAAPV  240
MIKFGSAPSS PARQAPLTIS VPPRSYAWAA PAAAPAPVED YRKYRGVRQR PWGKYAAEIR  300
DPKRRGSRVW LGTYDTPVDA ARAYDRAAFG MRGAKAILNF PNEIGTCGAD LWTPPPTPAT  360
QGATANKRKR QQEEPDVEVV AVVNKVAKTE ASSSILTQAS SFTSPSSMST RETTATASST  420
VTSTETSTDY AGSGTEGFPA EVATSSWSLD HSWEAWLGAL TPLSPLSPHP SLGFPPLIMR  480
RAYDKAEAFN DAVQLAVNQM TPLNGFPRLR TAEVATDTPP FLNFDSRITV AVAGQRLPLA  540
KVMVRALKGT RLGSNIAMRV VSSLLTCRIH GIPKAHRRQQ EKLFVRHVVR EQNQSCLPKA  600
ATAWLARKEP CAREHSAGRR RWGSMRPTRG TPGTVAWALR LLASIGSSRD AAGQSCQRDT  660
SPRDKSDSHT ERWHRASKNV SSSLHQSPRR NAIVESHPFR GSRAGFPNTG PPDSKPKSWI  720
TSRAPDRLG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-24282346468ATERF1
3gcc_A2e-24282346468ATERF1