PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02739.1.g00110.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 306aa    MW: 33257 Da    PI: 4.5457
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02739.1.g00110.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.71.6e-19129180256
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                   +y+GVr+++ +g++vAeIrdp+ +g   r++lg+++ + +Aa+a+++a+ +++g+
  Zmw_sc02739.1.g00110.1.am.mk 129 KYRGVRQRP-WGKYVAEIRDPKRRG--SRVWLGTYDLPIDAARAYDRAAFRMRGA 180
                                   8********.**********96554..**************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.26E-18129188No hitNo description
PROSITE profilePS5103222.998129187IPR001471AP2/ERF domain
SMARTSM003806.5E-35129193IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-31129188IPR001471AP2/ERF domain
PfamPF008477.2E-14129179IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-21129188IPR016177DNA-binding domain
PRINTSPR003671.5E-13130141IPR001471AP2/ERF domain
PRINTSPR003671.5E-13169189IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MDFTGDGDDF VLNFISEHFL RNEDGFPEAG WVVSSNPSFP VQPPPAAEPA FEPMPFLPQQ  60
QQQPERYVDM THDHTGAAPA AAVAAEKFRV AQEPAPQPVM ITLESEPFSP ASSHEWAASA  120
PAPVEDFHKY RGVRQRPWGK YVAEIRDPKR RGSRVWLGTY DLPIDAARAY DRAAFRMRGA  180
KAILNFPNEV GTRGADLLAS TPASAKKRKL QQVDPDVEVV TVVNKAPSAD EVPSWTSTPL  240
SSTSSSSCIS TCQTTEIVSS TVTSTETTLV GDGADGFPGT PSSWSWEELL CGLSPHPPLI  300
DVVDYS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-25130192668ATERF1
3gcc_A2e-25130192668ATERF1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021319358.17e-73ethylene-responsive transcription factor ERF105
TrEMBLA0A1B6PMF02e-71A0A1B6PMF0_SORBI; Uncharacterized protein
STRINGGRMZM5G805505_P011e-70(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465