PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02739.1.g00090.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 480aa    MW: 51750.1 Da    PI: 8.6484
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02739.1.g00090.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.7e-18283333255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp+ +g   r++lg+++t+ +Aa+a+++a+  ++g
  Zmw_sc02739.1.g00090.1.am.mk 283 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVDAARAYDRAAFGMRG 333
                                   8********.**********96554..**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.4E-31282342IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-22283342IPR016177DNA-binding domain
CDDcd000181.18E-17283342No hitNo description
PROSITE profilePS5103223.472283341IPR001471AP2/ERF domain
SMARTSM003803.1E-35283347IPR001471AP2/ERF domain
PfamPF008472.1E-12283333IPR001471AP2/ERF domain
PRINTSPR003671.2E-12284295IPR001471AP2/ERF domain
PRINTSPR003671.2E-12323343IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MATDSSRLSL RRTSPVHLLQ VVAWSAHRHG VKAGEMNQSA RPQLHGLQAT SSGHRLDVRA  60
SSRPLACRRR SSSNIISHDP GARSILCSSD ERQYIAKART LDTSLLPVRA RVPVSRPHGF  120
CRLILACARD QERPPELYSD MDFTGDADNF ALDFGLIREH LLGGSNGVPE ASPVVSGDAS  180
FIVQAPHSAE LCQSLAFLPQ QQHFEYIDMK HEYMGSAAPA VSGCEAAFSF RAAQEPAAPV  240
MIKFGSAPSS PARQAPLTIS VPPRSYAWAA PAAAPAPVED YRKYRGVRQR PWGKYAAEIR  300
DPKRRGSRVW LGTYDTPVDA ARAYDRAAFG MRGAKAILNF PNEIGTCGAD LWTPPPAPAT  360
QGATANKRKR QQEEPDVEVV AVVNKVAKTE ASSSILTQAS SFTSPSSMST RETTATASST  420
VTSTETSTDY AGSGTEGFPA EVATSSWSLD QSWEAWLGAL TPLSPLSPHP SLWFPPLIVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-252803431174Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001140538.19e-97uncharacterized protein LOC100272603
TrEMBLB4FPJ92e-95B4FPJ9_MAIZE; Ethylene-responsive transcription factor ERF105
TrEMBLK4JFF82e-95K4JFF8_MAIZE; AP2-EREBP-type transcription factor (Fragment)
STRINGGRMZM5G805505_P013e-96(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465