PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02613.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 671aa    MW: 72135.5 Da    PI: 6.6594
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02613.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY59.85.2e-19169230259
                                   --SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-S..SSTTEEEEEEES--SS- CS
                          WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversa..edpkvveitYegeHnhe 59 
                                   +Dg+ WrKYGqKe++g  +pr YYrC+++  gC+++ +v+r++  e+p + ei   g+H+++
  Zmw_sc02613.1.g00010.1.am.mk 169 EDGFIWRKYGQKEINGRMHPRLYYRCAYRhqGCTATLRVQRTReeEEPAAYEIASYGQHTCR 230
                                   7**************************9988*********97611567899********985 PP
2WRKY61.81.2e-19494554359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTT..EEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpk..vveitYegeHnhe 59 
                                   Dg+ WrKYGqKe++g ++pr Y+rC+++  gC+++++v+r++e+++  + ei Y g+H+++
  Zmw_sc02613.1.g00010.1.am.mk 494 DGFIWRKYGQKEINGRKHPRLYHRCAYShqGCTATRRVQRTHEEEQppAYEIAYYGHHTCS 554
                                   9************************88777**********9977553389*********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.4E-20163230IPR003657WRKY domain
PROSITE profilePS5081116.937163230IPR003657WRKY domain
SuperFamilySSF1182902.48E-18164230IPR003657WRKY domain
SMARTSM007748.5E-24168231IPR003657WRKY domain
PfamPF031061.3E-20169230IPR003657WRKY domain
SuperFamilySSF1182901.96E-18487554IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.3E-19490554IPR003657WRKY domain
SMARTSM007744.6E-24492555IPR003657WRKY domain
PfamPF031063.2E-21494553IPR003657WRKY domain
PROSITE profilePS5081116.352494554IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    Send to blast
MRGTSPDSDG IDRIKGPGTL VPIDRPRRLA NNQATREEPP PHSKQASEQS HAQRSAAVVP  60
SRGRSMPLAT PEAVVLELMT MGQQSVAHLG DLFRSACPAL PHQELAAEIL RCCGRVIAAL  120
TGNGGKKRKA VEHDNTAAAA AWSPPSTPPR KRARVGAEAL GLVKSGTTED GFIWRKYGQK  180
EINGRMHPRL YYRCAYRHQG CTATLRVQRT REEEEPAAYE IASYGQHTCR GAAASRQLPP  240
TVVDFGSNAW GCGTAPAASE LHLRSCWDDG EMSSPASEAA RFDEAQTVHE WRDAAAAPVE  300
VPSATLFHAS DPEMEFLDGG FDWESLINDW AGTSDKQGRP AAAGRFASLS GPTPINTPGV  360
WAHLAASDPA VSFKLAVLPA ETTETNKATR VMAPPSNAHA VVLEQMTMGQ ESAAHLVYLL  420
PASPHQELAA EILRCCGRVI AAIRAGGGGG EKRKAVEHED AAATTAVATC FPPRKRSRGA  480
EAPIRVMTCG TTVDGFIWRK YGQKEINGRK HPRLYHRCAY SHQGCTATRR VQRTHEEEQP  540
PAYEIAYYGH HTCSGAGASS APAPPPYVVD SGSNAWVSVG GLAPPSEHHQ LLSWDGEMSS  600
ASSAETGFEA EAQTVHEWHD TARTEEPSAT ALPYAPDPVT QFLDGSFDWA SVLNDDPFDF  660
GSALQHVATL Q
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-14169553969OsWRKY45
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025817680.18e-87probable WRKY transcription factor 66
TrEMBLA0A2S3HQI12e-85A0A2S3HQI1_9POAL; Uncharacterized protein
STRINGSi002401m2e-78(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP83223147