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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc02594.1.g00120.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 314aa MW: 34583 Da PI: 10.5699 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc02594.1.g00120.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 99.8 | 1.6e-31 | 71 | 175 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77
f+kv tpsdv+k++rlv+pk++ae++ + +e++ l++ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++g
Zmw_sc02594.1.g00120.1.am.mk 71 FDKVVTPSDVGKLNRLVIPKQHAEKYfplgSAANEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVITKGWSRFVKEKRLDAG 151
89***************************955556888******************************************* PP
-EEEEEE-.SS.SEE..EEEEE-S CS
B3 78 DfvvFkld.gr.sefelvvkvfrk 99
D+v F + g+ +++l++ ++r+
Zmw_sc02594.1.g00120.1.am.mk 152 DTVSFGRGvGEnARGRLFIDWRRR 175
******6557779999***99997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MDSMRRTPNS HEIIRGRERA TKEASERPTN LCGLAPSLLM TTELTAGPIR SGGGGGGGDD 60 AAVAVEKEHM FDKVVTPSDV GKLNRLVIPK QHAEKYFPLG SAANEKGLLL SFEDRTGKPW 120 RFRYSYWNSS QSYVITKGWS RFVKEKRLDA GDTVSFGRGV GENARGRLFI DWRRRPEPPA 180 PYYHHRLAIP SSLPFAPWAR AHYPAGIGGA GRTVLHLPPS PSSLYDSHRR RHDVYTPSTR 240 QVLLYRPHQQ QQATVVQESG LVRTPTSTPG QAEPPSVESS GSKRLRLFGV NLDCAAGSEE 300 GKGKGRRSAP PQPP
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 1e-62 | 66 | 177 | 3 | 115 | B3 domain-containing transcription factor NGA1 |
5os9_B | 1e-62 | 66 | 177 | 3 | 115 | B3 domain-containing transcription factor NGA1 |
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