PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02558.1.g00010.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 294aa    MW: 32474.1 Da    PI: 6.9758
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02558.1.g00010.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.72.8e-2979135259
                                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                      Dg+nWrKYGqK+vk+s+++rsYYrCt  gC +kkkve++  d+ vvei+Y+g Hnhe
  Zmw_sc02558.1.g00010.1.sm.mkhc  79 ADGFNWRKYGQKQVKSSDNSRSYYRCTNLGCLAKKKVEHCP-DGCVVEIIYRGAHNHE 135
                                     7****************************************.***************8 PP
2WRKY33.11.2e-10249269121
                                     ---SS-EEEEEEE--TT-SS- CS
                            WRKY   1 ldDgynWrKYGqKevkgsefp 21 
                                     ++Dgy+WrKYGqK vkg+++p
  Zmw_sc02558.1.g00010.1.sm.mkhc 249 VNDGYRWRKYGQKIVKGNPNP 269
                                     58*****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.8E-2672137IPR003657WRKY domain
PROSITE profilePS5081121.10473137IPR003657WRKY domain
SuperFamilySSF1182902.35E-2375137IPR003657WRKY domain
SMARTSM007743.2E-3278136IPR003657WRKY domain
PfamPF031067.2E-2280135IPR003657WRKY domain
Gene3DG3DSA:2.20.25.801.6E-8242270IPR003657WRKY domain
SuperFamilySSF1182907.32E-8244270IPR003657WRKY domain
PROSITE profilePS5081112.805244294IPR003657WRKY domain
SMARTSM007741.7E-4249282IPR003657WRKY domain
PfamPF031061.5E-6250269IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MSHQAALASV TAQAQMQLQS PVSSAYSEAP SSPFYIAPKA IMSLQQAPSA AEGTVCTPTA  60
DKLSSSESKS DHVVVNMVAD GFNWRKYGQK QVKSSDNSRS YYRCTNLGCL AKKKVEHCPD  120
GCVVEIIYRG AHNHEPPQKT RFSKERVTPI RVPSGDETLR LVNTEIVDSC TPTYKLDQRT  180
VTETSENASE QQLFCSSDCE GDAGNRSEDE HPSAEPLPKR RTVECSTPNL TPVLKTVREQ  240
KIIVQAGKVN DGYRWRKYGQ KIVKGNPNPS FNDHSTTDNH WAIQHTGLDI SDDD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004973142.11e-152probable WRKY transcription factor 32
TrEMBLA0A368RK161e-152A0A368RK16_SETIT; Uncharacterized protein
TrEMBLK3YGX01e-151K3YGX0_SETIT; Uncharacterized protein
STRINGSi013488m1e-152(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP58203455