PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02491.1.g00080.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family GRAS
Protein Properties Length: 585aa    MW: 63840.8 Da    PI: 8.0964
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02491.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS239.21.8e-73254693374
                          GRAS   3 elLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlar.svselykal.ppsetseknsseela 79 
                                   ++L +cA +v++g++e+a ++Lar     a  +g  p +Rla  f+  La+r+ r + + +++al  pse    +   + +
  Zmw_sc02491.1.g00080.1.am.mk  25 KALRDCAAHVEAGSTERAASCLARATGPaAVLAGnVPQRRLAVPFVDCLARRMIRpMDPAIADALiDPSECI--DRRCVRS 103
                                   68999*******************99884667775699*****************67777777775555554..5666678 PP

                          GRAS  80 alklfsevsPilkfshltaNqaIleavegeervHiiDfd..isqGlQWpaLlqaLasRpegppslRiTgvgspesgskeel 158
                                   a++l++e+sP++k ++++ N+aI eave+e+ vH+iDf   + q+ QW+ Ll+ +  R+e++p+lR+T+v+s    + e l
  Zmw_sc02491.1.g00080.1.am.mk 104 ARRLLFELSPFPKAAFVVSNSAIIEAVENEKNVHVIDFAgpAAQPNQWIELLHDFHRRREDAPHLRMTVVHS----DGEFL 180
                                   99************************************75589*****************************....9**** PP

                          GRAS 159 eetgerLakfAeelgvpfefnvlvakrledleleeL....rvkpgEalaVnlvlqlhrll..................... 214
                                    +  e   + A++l++ f++++ va +le+l+l++L    ++k+gEa a+ +  qlhrll                     
  Zmw_sc02491.1.g00080.1.am.mk 181 AKASELVVDEADRLNMAFQIHT-VAGQLETLDLDDLhgvlHLKSGEARAIICTQQLHRLLaapdetaptsgfvsaarhfnq 260
                                   **********************.7999****9999876668999************************************* PP

                          GRAS 215 .............................................desvsleserdevLklvkslsPkvvvvveqeadhns 250
                                                                                  +++++ +  ++L++ ++l Pkv+vv+eq+adhn+
  Zmw_sc02491.1.g00080.1.am.mk 261 matiarlqqvaststsssascgedtdahhtrspatplcfvsppasTPPLQMPAALASFLRAARGLAPKVMVVTEQDADHNG 341
                                   *******************************************88666677778888************************ PP

                          GRAS 251 esFlerflealeyysalfdsleak...............lpreseerikvErellgreivnvvacegaerrerhetlekWr 316
                                   +sF +rf++aleyy+a++ sl+a                + r + e + vE+++l++ei++v+  ega+rrerh +l+   
  Zmw_sc02491.1.g00080.1.am.mk 342 ASFRKRFADALEYYAAVYCSLAAAaaayrrpaaelxxaaYRRPAAELAEVEQAVLAEEIRDVLLREGARRRERHDRLQ--- 419
                                   *********************77779********999888888899*****************************776... PP

                          GRAS 317 erleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                           k+vpls+ a+   + +l +++++g +  e +g+l+l+W + pL+svSaWr
  Zmw_sc02491.1.g00080.1.am.mk 420 --------KNVPLSYVAMRRGNEMLGRCGVRGCESAELRGCLLLCWCSCPLYSVSAWR 469
                                   ........59***********************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098529.7331466IPR005202Transcription factor GRAS
PfamPF035146.2E-7125469IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    Send to blast
MHRPENDGAA RGAWADDDNI SHLGKALRDC AAHVEAGSTE RAASCLARAT GPAAVLAGNV  60
PQRRLAVPFV DCLARRMIRP MDPAIADALI DPSECIDRRC VRSARRLLFE LSPFPKAAFV  120
VSNSAIIEAV ENEKNVHVID FAGPAAQPNQ WIELLHDFHR RREDAPHLRM TVVHSDGEFL  180
AKASELVVDE ADRLNMAFQI HTVAGQLETL DLDDLHGVLH LKSGEARAII CTQQLHRLLA  240
APDETAPTSG FVSAARHFNQ MATIARLQQV ASTSTSSSAS CGEDTDAHHT RSPATPLCFV  300
SPPASTPPLQ MPAALASFLR AARGLAPKVM VVTEQDADHN GASFRKRFAD ALEYYAAVYC  360
SLAAAAAAYR RPAAELXXAA YRRPAAELAE VEQAVLAEEI RDVLLREGAR RRERHDRLQK  420
NVPLSYVAMR RGNEMLGRCG VRGCESAELR GCLLLCWCSC PLYSVSAWRP DPGEAAGDTE  480
YLSPPSQALE RRPATGTMQA MQNAGTARRR RGAWRNGRGA EVDRRRLRER DVSGSRNARC  540
GQLHGGALYD EAAAVDLTCS RPRSSLTVWA RRAAQNRPQC GPTTY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004980153.20.0scarecrow-like protein 3
TrEMBLA0A1E5WC770.0A0A1E5WC77_9POAL; Scarecrow-like protein 3
STRINGSi028262m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60438176