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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc02445.1.g00050.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
B3 |
Protein Properties |
Length: 226aa MW: 25466 Da PI: 10.8323 |
Description |
B3 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc02445.1.g00050.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | B3 | 74.4 | 1.3e-23 | 47 | 130 | 1 | 79 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS.-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS
B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesg.rsWevkliyrkksgryvltkGWkeFvkangLke 76
f+kv tpsdv+k++rlv+pk+fae+h g + ++ l + d +g W+++++y+++s++yv+tkGW+++v++++L +
Zmw_sc02445.1.g00050.1.am.mk 47 FEKVVTPSDVGKLNRLVVPKHFAERHlpllGAAARAGTVLCFHDARGhAAWRFRYSYWGSSQSYVMTKGWSRYVRDKRLAA 127
99****************************878889999*****999799******************************* PP
T-E CS
B3 77 gDf 79
gD+
Zmw_sc02445.1.g00050.1.am.mk 128 GDT 130
**7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 226 aa
Download sequence Send
to blast |
MALTLAQESW KSSELGGGAG GLAAEGASSD QQLLQSHTGG GVRERLFEKV VTPSDVGKLN 60 RLVVPKHFAE RHLPLLGAAA RAGTVLCFHD ARGHAAWRFR YSYWGSSQSY VMTKGWSRYV 120 RDKRLAAGDT DARRGRRLRL FGVDLELRAE PLTRIGVQDI MIIDYVIIIE KREKQQGRRQ 180 RTVEDWKADD DQRWRARETR TSNTLQGGKK NGDSVKFLVR VLLLSF
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
5os9_A | 4e-35 | 43 | 129 | 4 | 89 | B3 domain-containing transcription factor NGA1 |
5os9_B | 4e-35 | 43 | 129 | 4 | 89 | B3 domain-containing transcription factor NGA1 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |