PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Function |

Orthologous Group |

Publication

Basic Information? help Back to Top

TF ID

Zmw_sc02434.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 333aa MW: 34221.1 Da PI: 9.1646

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02434.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125	2.3e-39	60	120	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+ss Zmw_sc02434.1.g00150.1.am.mk 60 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSS 120 7899******************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-31	56	118	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.1E-33	62	118	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.059	64	118	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	66	102	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence Send to blast
MEEMIMAGNP YPNQNRNPAP AAPSAPVPQR AGGAPAAAPA GASSGAAAGA GTERRARPQK 60 EKALNCPRCN STNTKFCYYN NYSLQQPRYF CKTCRRYWTE GGSLRNVPVG GGSRKNKRSS 120 ASVSAAAAVA TSAAMVPVGL AAKNPKLMHE GAQDLNLAFP HHNGRGLQPP EFAAFPSLES 180 SSVGAFSALD LLRSTGCYVP LQHVQLGMPA EYESAGFALG ELRMPPPPQS QSMLGFSLDT 240 HGTGGVGGDG GYSAGLQDSA AAGRLLFPFE DLKPAVSAGG GVANAGGDQY KHNKDQGGDG 300 RAASRVTGGH DTPGFWNNSM IGNGSSNGGG GPW

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250\|UniProtKB:Q6K537}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025826521.1	1e-142	dof zinc finger protein 2-like isoform X2
Swissprot	B9F1L8	1e-117	DOF2_ORYSJ; Dof zinc finger protein 2
TrEMBL	A0A1E5VJZ3	1e-145	A0A1E5VJZ3_9POAL; Uncharacterized protein
STRING	Pavir.Aa00902.1.p	1e-142	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2369	34	86

Publications ? help Back to Top
Washio K Identification of Dof proteins with implication in the gibberellin-regulated expression of a peptidase gene following the germination of rice grains. Biochim. Biophys. Acta, 2001. 1520(1): p. 54-62 [PMID:11470159]