 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc02412.1.g00020.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
Family |
NAC |
Protein Properties |
Length: 526aa MW: 57781.3 Da PI: 9.4103 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc02412.1.g00020.1 | genome | ZGD | - |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 162.8 | 1.3e-50 | 259 | 384 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81
lppGfrFhPtdeelv +yL+++++g+ ++ +i+e+d+y+++Pw+Lp+++ +++ewyfF++rd+ky++g+r+nra+ +g
Zmw_sc02412.1.g00020.1.am.mk 259 LPPGFRFHPTDEELVLHYLCARAAGRGAPV-PIIAELDLYRFDPWELPARALFGRREWYFFTPRDRKYPNGSRPNRAAGTG 338
79*************************999.88***************87778999************************* PP
NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
yWkatg dk+v + +g++vg+kk Lvfy+g+ p+g+kt+W+mheyrl
Zmw_sc02412.1.g00020.1.am.mk 339 YWKATGADKPVAH-RGRTVGVKKALVFYHGKPPRGVKTEWIMHEYRL 384
*************.999****************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 526 aa
Download sequence Send
to blast |
MICSPLASAS RCDLDLGGHG CCPCARVAMA GGATIGEVVG EAVGEVVGSD GSLEEVTTRR 60 ERWQAGAVRC EKGGERGGAA LGGRGSATRR CRASIAPAGE RDVIPVRFKE PRAREIGLSP 120 SHPKFPIPTT VDAGRCGRFV DPTAAVVNHR RQRGVVSGKR PTSPPNHRAA AVAHQSQLAL 180 TPTRRSFVSL TVSVRLFIPL LSPPHSSPPT SLTDTVSSHR RNARPNPRHH RKEGNNRIYR 240 QEAMAGPARR RDAEAELNLP PGFRFHPTDE ELVLHYLCAR AAGRGAPVPI IAELDLYRFD 300 PWELPARALF GRREWYFFTP RDRKYPNGSR PNRAAGTGYW KATGADKPVA HRGRTVGVKK 360 ALVFYHGKPP RGVKTEWIMH EYRLADDAGR RKPGNGSLRL DDWVLCRLYN KKNEWEKLQQ 420 QQEEERKELE MDASHSQSFG DTRTPESGVD DVDVDQVPAF GDMGAVVPKK EVQEIGDLGG 480 ADDWLAGINL DDLQGLCPVP DDDFFSSLLV TPTAARAELG RHLLKF
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by salt and cold stresses (PubMed:18813954, PubMed:20632034). Induced by dehydration and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Takasaki H, et al.
The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice. Mol. Genet. Genomics, 2010. 284(3): p. 173-83 [PMID:20632034] - Ghosh T,Rai M,Tyagi W,Challam C
Seedling stage low temperature response in tolerant and susceptible rice genotypes suggests role of relative water content and members of OsSNAC gene family. Plant Signal Behav, 2016. 11(5): p. e1138192 [PMID:26829663] - Rahman H,Ramanathan V,Nallathambi J,Duraialagaraja S,Muthurajan R
Over-expression of a NAC 67 transcription factor from finger millet (Eleusine coracana L.) confers tolerance against salinity and drought stress in rice. BMC Biotechnol., 2016. 16 Suppl 1: p. 35 [PMID:27213684]
|