PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02383.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 428aa MW: 46670 Da PI: 11.4935 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4e-18 | 230 | 279 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+Wv+eIr+p +r++lg+f tae+Aa+a+++a++ + g Zmw_sc02383.1.g00050.1.am.mk 230 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAARIMCG 279 69******9.**********8.....334**********************98765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.87E-28 | 229 | 287 | No hit | No description |
SuperFamily | SSF54171 | 1.11E-19 | 230 | 287 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 1.1E-10 | 230 | 278 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.692 | 230 | 287 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-32 | 230 | 287 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.5E-36 | 230 | 293 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-10 | 231 | 242 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 1.1E-10 | 253 | 269 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence Send to blast |
MHAAEQLAAW LCTHSAADRP GIRPRSAKGS LLLNSEAMSI VLVVPVGARA PPCLHVTRED 60 KPAIRSPCGF DRSSPPRRDK RVFGAPPSQL WSRAAQAPDR QCTNDASVVR DGDGTNGEDR 120 EKDTVRCTRT GAGGRRAYQH HIGVRNRRCV QRLRSICCSS QGGSWSSCSS QCDRMSIQPN 180 ERERPVHQLL LGSAALLSLS RHKASCPAVT PSEQETRRLV SFPMVRPQQR YRGVRQRHWG 240 SWVSEIRHPL LKTRIWLGTF ETAEDAARAY DEAARIMCGP RVRTNFPGDA GPGADVASSF 300 LSPALVAKLH RFNLASRRSE QDIRGVIARD GASSMTVMEK GGFVCRPLPG RSLMEGGGVE 360 SRVGFSSSWH VPPHAPRPNH VAPLRLRATS SPPAARRQRP RSSKKYAALS IAAGKATGVA 420 AENMSGAR |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 6e-15 | 229 | 287 | 4 | 63 | ATERF1 |
3gcc_A | 6e-15 | 229 | 287 | 4 | 63 | ATERF1 |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00526 | DAP | Transfer from AT5G25190 | Download |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1418 | 35 | 118 |