PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02376.1.g00120.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 371aa MW: 39701.6 Da PI: 4.373 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.7 | 3.4e-19 | 123 | 174 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 ++++GVr ++ +g+++AeIrd + r r++lg+f+taeeAak ++ a+ +l+g+ Zmw_sc02376.1.g00120.1.am.mk 123 PRFRGVRKRP-WGKYAAEIRDpW-----RrVRVWLGTFDTAEEAAKVYDSAAIQLRGA 174 689*******.**********88.....55*************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.85E-28 | 123 | 180 | No hit | No description |
Pfam | PF00847 | 1.4E-11 | 123 | 173 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.18E-20 | 124 | 181 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 2.7E-28 | 124 | 181 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 3.1E-33 | 124 | 187 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.669 | 124 | 181 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.1E-10 | 125 | 136 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 5.1E-10 | 147 | 163 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 371 aa Download sequence Send to blast |
MWNMEDEEMF VAVRRTEHVE LVTTRAVSVD SAASKDAGPG PRTVRVFCDD YDATDSSGDE 60 DDDDAYALAA ARRRVKRYVQ EVRLEPAAAK DSPAAAKPSS TKARLALPVS GRKRKDDGPG 120 GEPRFRGVRK RPWGKYAAEI RDPWRRVRVW LGTFDTAEEA AKVYDSAAIQ LRGADATTNF 180 GQVAPDDADA DRFTVQTPAP AAAPAASSKN NASSSSATSS YDSGQESSHV AAAASPTSVL 240 RSFPPSAEDT GAACAKKSTY TKPGGALPPS VAETGESSGV FGCPFSDYVS LSSGDEFPPV 300 VTDFDSLFGD FPEPPLDFLA ELPDEVPLFP VCDERQQQTS SSSSAAKWQQ VDDLFQDITD 360 LFQIDPLPAV V |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 3e-18 | 118 | 180 | 7 | 71 | Ethylene-responsive transcription factor ERF096 |
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Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002457105.2 | 1e-119 | ethylene-responsive transcription factor CRF2 | ||||
TrEMBL | A0A1E5VYG9 | 1e-119 | A0A1E5VYG9_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Eb00092.1.p | 1e-110 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1690 | 36 | 97 |