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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc02298.1.g00200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
NAC |
Protein Properties |
Length: 300aa MW: 33557.9 Da PI: 7.6081 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc02298.1.g00200.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 168.8 | 1.8e-52 | 19 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lppGfrFhPtd+elv +yL++k++g++l++ +i+evd+yk++PwdLp+++ +++ewyfF++rd+ky++g+r+nra+
Zmw_sc02298.1.g00200.1.sm.mkhc 19 LPPGFRFHPTDDELVEHYLCRKAAGQRLPV-PIIAEVDLYKFDPWDLPERALFGTREWYFFTPRDRKYPNGSRPNRAAG 96
79****************************.88***************8877899************************ PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+gyWkatg dk+v +g++ g+kk Lvfy g+ap+g+ktdW+mheyrl
Zmw_sc02298.1.g00200.1.sm.mkhc 97 NGYWKATGADKPVAP-RGRTLGIKKALVFYAGKAPRGVKTDWIMHEYRL 144
*************99.999****************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 300 aa
Download sequence Send
to blast |
MTKAMAVRRE RDAEAELNLP PGFRFHPTDD ELVEHYLCRK AAGQRLPVPI IAEVDLYKFD 60 PWDLPERALF GTREWYFFTP RDRKYPNGSR PNRAAGNGYW KATGADKPVA PRGRTLGIKK 120 ALVFYAGKAP RGVKTDWIMH EYRLADAGRA AAAKKGSLRL DDWVLCRLYN KKNEWEKMQM 180 KKAAAAAKDE AGGDMTTSYS HSHSWGETRT PESEIVDNDP FPAFQDPAAQ MMVPKKEEVD 240 DAGAANRNDL FVDLSYDDIQ SMYSGLDMLP PSGEDFYSSL FASPRVKGNQ PAGAGGLAPF
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that possesses transactivation activity (PubMed:16924117, PubMed:20632034). Transcription activator involved in response to abiotic stresses. Plays a positive role during dehydration and salt stress. Binds specifically to the 5'-CATGTG-3' motif found in promoters of stress-responsive genes (PubMed:16924117). {ECO:0000269|PubMed:16924117, ECO:0000269|PubMed:20632034}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by drought stresss, salt stress and cold stress (PubMed:16924117, PubMed:20632034). Induced by abscisic acid (ABA) (PubMed:16924117). Induced by methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:16924117, ECO:0000269|PubMed:20632034}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Takasaki H, et al.
The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice. Mol. Genet. Genomics, 2010. 284(3): p. 173-83 [PMID:20632034] - Chen Q,Wang Q,Xiong L,Lou Z
A structural view of the conserved domain of rice stress-responsive NAC1. Protein Cell, 2011. 2(1): p. 55-63 [PMID:21337010]
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