PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc02264.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 1073aa MW: 113465 Da PI: 10.9298

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02264.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	56.9	5.1e-18	826	876	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f++ae+Aa a+++ + kl+ge Zmw_sc02264.1.g00020.1.am.mk 826 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDSAEDAAMAYDREAFKLRGE 876 59****9.******955...5************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00018	3.61E-29	825	884	No hit	No description
PROSITE profile	PS51032	22.787	826	883	IPR001471	AP2/ERF domain
SuperFamily	SSF54171	3.07E-22	826	885	IPR016177	DNA-binding domain
SMART	SM00380	7.5E-38	826	889	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	7.2E-31	826	884	IPR001471	AP2/ERF domain
Pfam	PF00847	2.2E-11	827	876	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.5E-9	827	838	IPR001471	AP2/ERF domain
PRINTS	PR00367	1.5E-9	849	865	IPR001471	AP2/ERF domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009651	Biological Process	response to salt stress
GO:2000070	Biological Process	regulation of response to water deprivation
GO:0005634	Cellular Component	nucleus
GO:0005737	Cellular Component	cytoplasm
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1073 aa Download sequence Send to blast
MKVERARDAA TLQLALAATG HACGFTARSR PANGRSATGG TAQGREGLPT DMLPSQNSRI 60 GREENPPESA ESHHPYALYC RVNFNAEGPK CHQREGGCVH RTASVLKTGR VVFVPERKGI 120 LNWLAYATPI HCLETTAGLF WSPGRVALVA VGQALPYLNL VLTSSRRPKL ALASTSRGGS 180 SLLAYEDAHG SIIDSFLCGV HVDVLRASGR PQPKSSRHSQ KRAHTASSGK VNALPAPPAY 240 VATADRSERA RNRSALGSTA PTATARAGRL CARGCAVAAT STTQTIQCRK GSGCGRTGRP 300 RTPSCLTAVA GEGGWAVSAP VSFPSSLATP TDVGFCNAIV DFVGSGLGVE EEAKISGASS 360 WSRPFAGRRK RCHAGAEVRV MLPKGEVRSM PLRRPISSFS SYLIGKNMEL SPALGGHTSR 420 IRRTPITVVA SNHIVLGGGG GYRRTAALRL RIGCRNRAGV RSYGRRPESV DVDDIYFVRS 480 YAKGGITQAQ ALLLPGWLTA TGNTPLRFVH AMTCRDQGIT TVTGSCGAGH RPGIVSLAHS 540 AASAPHFFFL SSPNAVMLWH QKQNATTRTP APRAASGRLP ADRFITGSSF ASPRSKLASA 600 SVSLRALAIA SIELEMEGSS GSSDSSGGGT GGAGGRGRRW KGKDITPIQP RRQLAPVIEE 660 ASVASLRPLR KIGRPSDRLQ RSASSLSKYS SSSSAPPSPR SSAISSSAPS GRYIFPFAYE 720 PSTPAGGPLP AWQQSSSASQ PASPQQQKPR PSLQRQGQQM ISFGAPPPQY EAQLLRPESA 780 QQQQQMLRYW SEALNLSPRG GQAGGGVLPS LYQHLMRAPP PPPQKLYRGV RQRHWGKWVA 840 EIRLPRNRTR LWLGTFDSAE DAAMAYDREA FKLRGENARL NFPDRFLGKG RAGGSGRTSA 900 SSAAASAALG AGLSSPSPSP PKTPEEASMQ QTTALRRAGG SVDKQTTQPL VAASSAQEGS 960 SSDMAMPHSA EMFHAPMASG SDWGPADEAW FSTWGPGSSL WDYDMDSARG LFLHGRFATD 1020 EAGMERSNAQ ETTATNAAAT GTDMACDHVP PVTPASSSPT HSQTPPDTSN FKS

Sequence ? help Back to Top

Protein Sequence Length: 1073 aa Download sequence Send to blast

MKVERARDAA TLQLALAATG HACGFTARSR PANGRSATGG TAQGREGLPT DMLPSQNSRI  60
GREENPPESA ESHHPYALYC RVNFNAEGPK CHQREGGCVH RTASVLKTGR VVFVPERKGI  120
LNWLAYATPI HCLETTAGLF WSPGRVALVA VGQALPYLNL VLTSSRRPKL ALASTSRGGS  180
SLLAYEDAHG SIIDSFLCGV HVDVLRASGR PQPKSSRHSQ KRAHTASSGK VNALPAPPAY  240
VATADRSERA RNRSALGSTA PTATARAGRL CARGCAVAAT STTQTIQCRK GSGCGRTGRP  300
RTPSCLTAVA GEGGWAVSAP VSFPSSLATP TDVGFCNAIV DFVGSGLGVE EEAKISGASS  360
WSRPFAGRRK RCHAGAEVRV MLPKGEVRSM PLRRPISSFS SYLIGKNMEL SPALGGHTSR  420
IRRTPITVVA SNHIVLGGGG GYRRTAALRL RIGCRNRAGV RSYGRRPESV DVDDIYFVRS  480
YAKGGITQAQ ALLLPGWLTA TGNTPLRFVH AMTCRDQGIT TVTGSCGAGH RPGIVSLAHS  540
AASAPHFFFL SSPNAVMLWH QKQNATTRTP APRAASGRLP ADRFITGSSF ASPRSKLASA  600
SVSLRALAIA SIELEMEGSS GSSDSSGGGT GGAGGRGRRW KGKDITPIQP RRQLAPVIEE  660
ASVASLRPLR KIGRPSDRLQ RSASSLSKYS SSSSAPPSPR SSAISSSAPS GRYIFPFAYE  720
PSTPAGGPLP AWQQSSSASQ PASPQQQKPR PSLQRQGQQM ISFGAPPPQY EAQLLRPESA  780
QQQQQMLRYW SEALNLSPRG GQAGGGVLPS LYQHLMRAPP PPPQKLYRGV RQRHWGKWVA  840
EIRLPRNRTR LWLGTFDSAE DAAMAYDREA FKLRGENARL NFPDRFLGKG RAGGSGRTSA  900
SSAAASAALG AGLSSPSPSP PKTPEEASMQ QTTALRRAGG SVDKQTTQPL VAASSAQEGS  960
SSDMAMPHSA EMFHAPMASG SDWGPADEAW FSTWGPGSSL WDYDMDSARG LFLHGRFATD  1020
EAGMERSNAQ ETTATNAAAT GTDMACDHVP PVTPASSSPT HSQTPPDTSN FKS

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
2gcc_A	4e-19	825	885	4	65	ATERF1
3gcc_A	4e-19	825	885	4	65	ATERF1

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3691	32	68