PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02222.1.g00170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | MYB | ||||||||
Protein Properties | Length: 713aa MW: 76913.4 Da PI: 9.1559 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.1 | 8.6e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrWT+eEde+l+ +++++G g+W++ ++ g+ R++k+c++rw +yl Zmw_sc02222.1.g00170.1.am.mk 14 RGRWTAEEDEILASYIAKHGEGSWRSLPKNAGLLRCGKSCRLRWINYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 39.8 | 1e-12 | 67 | 173 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT........................................................... CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg........................................................... 22 rg+ ++eE+++++++++ lG+ Zmw_sc02222.1.g00170.1.am.mk 67 RGNISKEEEDIIIKLHATLGNSlkeaqghdsrdprsrlrfgggelssvptpksssrhsvkrtgvgcyvhrwsvpvrvpagl 147 7899****************99*********************************************************** PP .-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 23 .tWktIartmgkgRtlkqcksrwqkyl 48 tW++Ia++++ gRt++++k++w+++l Zmw_sc02222.1.g00170.1.am.mk 148 mTWSLIASHLP-GRTDNEIKNYWNSHL 173 ***********.************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.7E-22 | 5 | 64 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 22.439 | 9 | 65 | IPR017930 | Myb domain |
SMART | SM00717 | 3.7E-13 | 13 | 63 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 6.1E-16 | 14 | 61 | IPR001005 | SANT/Myb domain |
SuperFamily | SSF46689 | 1.7E-20 | 15 | 88 | IPR009057 | Homeodomain-like |
CDD | cd00167 | 6.60E-11 | 16 | 61 | No hit | No description |
PROSITE profile | PS50090 | 7.503 | 62 | 173 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 3.3E-20 | 65 | 85 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 1.1E-11 | 66 | 175 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 3.3E-20 | 146 | 177 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.76E-7 | 149 | 178 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 3.8E-7 | 149 | 173 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 2.15E-6 | 150 | 173 | No hit | No description |
Pfam | PF06640 | 1.8E-56 | 191 | 391 | IPR010588 | Myb-related protein P, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0051555 | Biological Process | flavonol biosynthetic process | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 713 aa Download sequence Send to blast |
MGRAPCCEKV GLKRGRWTAE EDEILASYIA KHGEGSWRSL PKNAGLLRCG KSCRLRWINY 60 LRADVKRGNI SKEEEDIIIK LHATLGNSLK EAQGHDSRDP RSRLRFGGGE LSSVPTPKSS 120 SRHSVKRTGV GCYVHRWSVP VRVPAGLMTW SLIASHLPGR TDNEIKNYWN SHLSRQIHTY 180 RRIFTAGNDT TITIDISKLH SAGKRRGGRT PGRSALKSTT SSDDKTGSKK VDAEPEPAET 240 TTKAKETSAF SPAAATSAAS SPPQSDDGAR SVVVDPDQNQ PNSVSDNDGP CSEDASGLMT 300 SLLEEPLDLG LWEAETEMDM EALLLSNTGI DGAAGYSSSF TTGLEAAAGD DLLDMDWDGF 360 AAHLWGDPAQ NNQAAAEPQA AVGCNPEELE SRSDDSGRLR HKDATMETAP PHCEFVIFSY 420 PYQLQRRKYD KRRISLGALR ILAPLAVDAV SCPRTAAGQS PIARHGRGGN GRDDDIMLNQ 480 SIDLHFYRYV FASEILMTRR ATSHPACPAR DRRSADGSVP GGVAKSCLVA LSGELFGPAE 540 CRRRVGWIAH RPAAHLQRTR VSAHSYQWTL IGVTAAALLI DVNCKAKTQT RVRASLHARP 600 GSRNRAPAEG EDDAATRPAP DTARARQPSA SCALPLRAAA PVPVSSTHPL RFAVTKSGGS 660 AVTERGNHHR FRLSVGALVD GCTRISAWVI IAVVVLPASD PFVSYRARKG GAA |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00627 | PBM | Transfer from PK06182.1 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025797897.1 | 1e-116 | myb-related protein P-like | ||||
TrEMBL | A0A0E0KCP6 | 1e-118 | A0A0E0KCP6_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC03G13890.1 | 1e-118 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP79 | 38 | 563 |