PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02214.1.g00030.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 304aa    MW: 32267.9 Da    PI: 6.0987
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02214.1.g00030.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY772.2e-24108169159
                                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                     ldDg++WrKYGqKe+++s++p++Y+rCt++   +C ++++v+r++e p++ ++tY g H+++
  Zmw_sc02214.1.g00030.1.sm.mkhc 108 LDDGHAWRKYGQKEIQNSKHPKAYFRCTHKfdqQCLAQRQVQRCDEAPETYTVTYIGAHTCR 169
                                     59***************************9999**************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.803.6E-2595171IPR003657WRKY domain
SuperFamilySSF1182901.23E-23106171IPR003657WRKY domain
PROSITE profilePS5081119.703108171IPR003657WRKY domain
SMARTSM007742.2E-34108170IPR003657WRKY domain
PfamPF031061.9E-22109169IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MAAAPYEQVM EDMLRGRDFA AQLQGLLRDS PKAGLIVDQI LHAFSRAIDA AKAMATEEGS  60
EVQSDVTCAG GGGGKRKVAA GGSGGDRGRA SRRRTQTASV KTVITKDLDD GHAWRKYGQK  120
EIQNSKHPKA YFRCTHKFDQ QCLAQRQVQR CDEAPETYTV TYIGAHTCRD PATVARVVLH  180
HAGAEASALP AGSRLISFAP NGSTPATSTT TTTTTGNANQ QADHPEGAVL LRPGSGLPPL  240
KVEGVDQEEV LSSLTPAGSA RNPVATPGPD QGDVTSDLQF FGDGIGEIFT MDDGTFDLED  300
IFRI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-36102169269OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004962450.11e-111probable WRKY transcription factor 70
TrEMBLA0A0A9VCV71e-116A0A0A9VCV7_ARUDO; Uncharacterized protein
STRINGSi022702m1e-110(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76563549