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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc02176.1.g00140.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 251aa MW: 27930.5 Da PI: 7.1172 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc02176.1.g00140.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 50.2 | 6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd+ lv ++++G +W++ ++ g+ R++k+c++rw +yl
Zmw_sc02176.1.g00140.1.sm.mkhc 14 KGPWTPEEDKVLVAHIQRFGHSNWRALPKQAGLLRCGKSCRLRWINYL 61
79******************************99************97 PP
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2 | Myb_DNA-binding | 55.4 | 1.4e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
Zmw_sc02176.1.g00140.1.sm.mkhc 67 RGNFTKEEEETIIQLHELLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
89********************.*********.************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MGRAPCCEKM GLKKGPWTPE EDKVLVAHIQ RFGHSNWRAL PKQAGLLRCG KSCRLRWINY 60 LRSDIKRGNF TKEEEETIIQ LHELLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLEPTK 120 QDHAPAAGAS KKKQKRAGAK KTPEEVSAAA APVSPERSFS SSVTESSMTE QGKTGSSGFS 180 KDESFTSSEE FQIDDSFWSE ALSMPLESFD VPMDESFGVP VGTSSAGGAE DMDYWVKLFM 240 ETDGVQELPL I
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator involved in cold stress response (PubMed:14675437, PubMed:20807373, PubMed:22246661). Regulates positively the expression of genes involved in reactive oxygen species (ROS) scavenging such as peroxidase and superoxide dismutase during cold stress. Transactivates a complex gene network that have major effects on stress tolerance and panicle development (PubMed:20807373). {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|PubMed:22246661}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By cold stress. {ECO:0000269|PubMed:14675437, ECO:0000269|PubMed:20807373, ECO:0000269|Ref.2}. |