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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02164.1.g00050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 225aa MW: 23426 Da PI: 6.5041 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 26 | 75 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ t+e Aa+a++aa ++l+g Zmw_sc02164.1.g00050.1.am.mk 26 QYKGVRMRS-WGSWVSEIRAP---NQKRRIWLGSYATPEAAARAYDAALLCLKG 75 6*****998.**********9...336*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.2E-29 | 25 | 85 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.142 | 26 | 83 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 2.5E-34 | 26 | 89 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.1E-11 | 26 | 75 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 9.81E-20 | 26 | 84 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 2.15E-18 | 26 | 85 | No hit | No description |
PRINTS | PR00367 | 4.9E-8 | 27 | 38 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.9E-8 | 49 | 65 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MVKTPSNPAA TAFTEGACRG KAAARQYKGV RMRSWGSWVS EIRAPNQKRR IWLGSYATPE 60 AAARAYDAAL LCLKGADAVL NFPSSSPSRN VAGGDRGHLD LAAGSVPPRS IQRAAAAAAA 120 AFDTCTSVDA SGDDRCSSSA GASATATTSA SLSPTPRRDD HTTPSSSAAA STGSSAQGEE 180 MWTDLLDVLA SPKCVDLMAA RAAPFSSTWE EPEDDGEMMR LWSFC |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002465511.1 | 2e-68 | ethylene-responsive transcription factor ERF014 | ||||
TrEMBL | A0A3L6TSU0 | 5e-68 | A0A3L6TSU0_PANMI; Uncharacterized protein | ||||
STRING | Sb01g040280.1 | 6e-68 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP10830 | 30 | 40 |