PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02160.1.g00130.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 424aa    MW: 45212.3 Da    PI: 7.4261
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02160.1.g00130.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.97.7e-16190239355
                           AP2   3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   + GVr ++ +g+++AeIrd    + k +r++lg+f+++e Aa a+++a+ + +g
  Zmw_sc02160.1.g00130.1.am.mk 190 FIGVRKRP-WGKFAAEIRDsT--R-KGARVWLGTFDSPEAAALAYDQAAFSVRG 239
                                   67******.**********32..2.24**********************99887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003808.8E-32189253IPR001471AP2/ERF domain
PROSITE profilePS5103221.588189247IPR001471AP2/ERF domain
SuperFamilySSF541712.94E-20190248IPR016177DNA-binding domain
PRINTSPR003671.6E-7190201IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-27190247IPR001471AP2/ERF domain
CDDcd000183.32E-15190249No hitNo description
PfamPF008471.1E-11191239IPR001471AP2/ERF domain
PRINTSPR003671.6E-7213229IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MDPLHRAGTS MAGRIDVYFR ERCGAPGRAR PSYIDLALVT GLRSYPAALR HRTVGFGHVP  60
TSMEPGPTQV RDSYKTRAGS PCWPAERLPL LCFSTTTLHT SSRNELACLN DPFYSMDPYA  120
SSCMFSHPCA GEISGLVEFT AGGFDDDSAS ASCSEESSSS AGNGNSNSST GVHDKEETKQ  180
QQRSNDKQPF IGVRKRPWGK FAAEIRDSTR KGARVWLGTF DSPEAAALAY DQAAFSVRGA  240
AAVLNFPVDR VQDSLRALAL SSSTSAGAGS PVLALKSRHS LRKRSPNKNK TRPRSEAASV  300
APQQQPPCTG GGGVVELEDL GADYLDELLR VTSGGCQGSR GGHQASCPRS ESPAKYLEEE  360
EKLAVKRAEL SRQLRDAAAD LFVVSQKIAP EEDEAAMADM ADAIRGNKDA SLKSDVAGGS  420
SIAF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A6e-231902471572Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27737249