 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Zmw_sc02158.1.g00030.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
NF-YB |
| Protein Properties |
Length: 170aa MW: 18893.7 Da PI: 5.2464 |
| Description |
NF-YB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc02158.1.g00030.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NF-YB | 70.2 | 3.5e-22 | 2 | 84 | 11 | 93 |
NF-YB 11 anvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93
+ v+rim+ + P n+ki d+k+ +++c+ ef + +t ea+ ++e r+ ++gdd++ al+ +Gf dyv pl++ l++y e
Zmw_sc02158.1.g00030.1.am.mk 2 TAVTRIMHCAQPRNSKINADTKDAMNQCILEFTARLTHEAAWVGKEESRRMMSGDDIILALGRMGFSDYVGPLTLLLQRYCES 84
679*****************************************************************************875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 170 aa
Download sequence Send
to blast |
MTAVTRIMHC AQPRNSKINA DTKDAMNQCI LEFTARLTHE AAWVGKEESR RMMSGDDIIL 60
ALGRMGFSDY VGPLTLLLQR YCESRAIMPR GWQTELASQE PMSSSQVVVE QQLQAAMPTV 120
GVELQPPEPD LTLGLAPPAP RHVTELELHE EVYKVWPRSV GPMPPANGNQ
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1n1j_A | 1e-15 | 4 | 81 | 14 | 91 | NF-YB |
| 4awl_B | 1e-15 | 4 | 81 | 15 | 92 | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA |
| 4csr_A | 1e-15 | 4 | 81 | 15 | 92 | NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT BETA |
