PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02155.1.g00150.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family DBB
Protein Properties Length: 296aa    MW: 31502.2 Da    PI: 4.8315
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02155.1.g00150.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box19.81.6e-06952542
                        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42
                                    +C  ++ +++   C  ++  lC  C    H+       H+++pl
  Zmw_sc02155.1.g00150.1.am.mkhc  9 NCGVCGGERAAVLCCADEAALCSACDRRVHRAnklagkHRRIPL 52
                                    7*****************************77999999999886 PP

2zf-B_box223.3e-0768107437
                        zf-B_box   4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 
                                     + C+ ++  +   fC +++  lC+dC + +H+       H
  Zmw_sc02155.1.g00150.1.am.mkhc  68 PLCDVCKLRRGLVFCVEDRAILCPDCDEPIHSAndltakH 107
                                     78*****999*********************655565555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.911552IPR000315B-box-type zinc finger
SMARTSM003361.6E-10552IPR000315B-box-type zinc finger
PfamPF006432.1E-5952IPR000315B-box-type zinc finger
CDDcd000215.84E-61052No hitNo description
PROSITE profilePS501199.0365112IPR000315B-box-type zinc finger
SMARTSM003365.8E-1365112IPR000315B-box-type zinc finger
CDDcd000215.27E-768112No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MSPGTMRVNC GVCGGERAAV LCCADEAALC SACDRRVHRA NKLAGKHRRI PLLHPSADAS  60
SDDNTTGPLC DVCKLRRGLV FCVEDRAILC PDCDEPIHSA NDLTAKHSRF LLVGAKLSTA  120
LGDEAPSSPD CGGGGESDGV AAACAQDSST DRSPVLECSD NNGSGGGAMI SDYLTNICPG  180
WRVDDLLFDE SPFSAKPGRD DQHVTSTDAD LFDVVAGRSE KRVLWGTSWT GDLGFEEVPT  240
AMAAPTTAAR PITNKQGRAR ETYWKNTMDN DSDVFAVPEF TPPPAKKARP SSFWCF
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025812143.11e-109B-box zinc finger protein 20-like
TrEMBLA0A2T7DU711e-108A0A2T7DU71_9POAL; Uncharacterized protein
STRINGSi006993m1e-103(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP121002430