PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc02085.1.g00180.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family WRKY
Protein Properties Length: 185aa    MW: 20915.7 Da    PI: 12.151
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc02085.1.g00180.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY29.41.6e-095582229
                                  --SS-EEEEEEE--TT-SS-EEEEEE-S CS
                          WRKY  2 dDgynWrKYGqKevkgsefprsYYrCts 29
                                  dDg++WrKYG K+  +s+fpr  +r  +
  Zmw_sc02085.1.g00180.1.am.mk 55 DDGHQWRKYGEKKLSNSNFPRFVFRSHQ 82
                                  8********************9999544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.805.1E-94683IPR003657WRKY domain
SuperFamilySSF1182904.18E-94682IPR003657WRKY domain
PROSITE profilePS508118.8574998IPR003657WRKY domain
SMARTSM007744.1E-554104IPR003657WRKY domain
PfamPF031065.8E-85583IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MHVLARVPSP GVRIRGWSRI PMGDATFSRA RFTRRCPAQH VGWRCWTTDT YAPYDDGHQW  60
RKYGEKKLSN SNFPRFVFRS HQENRRRRDV LPRRDGSPAL AHPTSSFARL FFTGKSRGFS  120
WILDRGGGLF TVGDRLGLGT AREVGGGARV LDRRRRRGGS AGPGAPRRDC SLNYDPRSRC  180
SGSPL