PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc02023.1.g00130.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 426aa MW: 45921.2 Da PI: 10.8282 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 36.6 | 1.1e-11 | 128 | 167 | 2 | 45 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAaka 45 +ykGVr+++ +g+Wv+eIr+p + r r +lg++ Aa++ Zmw_sc02023.1.g00130.1.am.mk 128 KYKGVRRRP-WGKWVSEIRVPGT---RERLWLGSYAXXXXAARL 167 8********.**********943...5*********99999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 7.6E-6 | 128 | 167 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-12 | 128 | 176 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 14.71 | 128 | 166 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.40E-13 | 128 | 171 | No hit | No description |
Gene3D | G3DSA:3.30.730.10 | 1.5E-15 | 128 | 166 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 6.54E-10 | 128 | 167 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.5E-6 | 129 | 140 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.5E-6 | 151 | 167 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MLRRPRGPFR GPRLLLGRRS VASPSLIASV NGETGSRCAI GRPRSFLLRF GPSVRAVVRS 60 CGRAETNTAT QLVRMRTNGM VNPCEALTST HTRINRCLGG VVCRTDDAGG EMSRSMASGG 120 AEPRRCNKYK GVRRRPWGKW VSEIRVPGTR ERLWLGSYAX XXXAARLNFP ERAASYAAAH 180 HRSRLSPRSV QRVASDAGMA ADAQLLEAWE RASPTTTTAA QQVASVGIGV ARGGDEELEP 240 WPCPYAPPTW NDGSRATAGS WATAPRADGS GSSSAGTCED GRQLVYGDIS VDDMEILIHG 300 DGPFWRLARL HCSPPPPVSM AFRGRRPAEN EYQVHEPGSN ALSDASHLSM HVVCLGLGLG 360 LGREQGRAGR RLDRFHGALN LVVVWTQIAG AARLNLVGGI NSYPIPCGRH LCSAETRIAI 420 SRCIAK |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6433 | 29 | 51 |