PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc02003.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

WRKY

Protein Properties

Length: 261aa MW: 28097.1 Da PI: 4.693

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc02003.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	40.3	6.2e-13	114	155	19	59
SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 19 efprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 + r+YY+C+s C ++k ver+ e p+v++itY eH h Zmw_sc02003.1.g00040.1.am.mk 114 PKRRGYYKCSSLkACLARKSVERNPEKPEVLTITYIAEHCHA 155 4569****9989***********************996 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.20.25.80	1.9E-12	113	157	IPR003657	WRKY domain
SuperFamily	SSF118290	2.35E-10	114	157	IPR003657	WRKY domain
Pfam	PF03106	3.5E-10	114	154	IPR003657	WRKY domain
PROSITE profile	PS50811	15.858	114	157	IPR003657	WRKY domain
SMART	SM00774	2.9E-6	114	156	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence Send to blast
MEPLNDWDLQ AVVRSCGTAA CSSSSAAVES LHKEAARSMV EAGSESFLGQ PAATLRDLDS 60 LNLDHELPFS ITPASDGRAN DGQEVLISSP AESASGQSRK KAGRRKPGVR APRPKRRGYY 120 KCSSLKACLA RKSVERNPEK PEVLTITYIA EHCHAVPTML NSVAGTTRNR PPSPVPDRRS 180 QSDEPSATNN RREDSADASS ITADGGSAGT PDDENVDLWP VDMSLLDEYP LDDLLGPFAD 240 GVDLCLEDVD ERDGFGRRMS L

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025809273.1	1e-74	WRKY transcription factor 22-like
TrEMBL	A0A3L6SXR1	5e-84	A0A3L6SXR1_PANMI; WRKY transcription factor 22-like
STRING	Pavir.J29891.1.p	9e-75	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4279	30	70