PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01995.1.g00040.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 470aa MW: 48017.6 Da PI: 9.0586

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01995.1.g00040.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	4e-39	94	154	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ l+cprCds ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+s+ Zmw_sc01995.1.g00040.1.am.mk 94 PEQGLRCPRCDSPNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRSR 154 67899*****************************************************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF02701	1.1E-32	96	152	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.609	98	152	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-26	98	151	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	100	136	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 470 aa Download sequence Send to blast
MSALDGDHRL QSARRPSNRG GESTAGSWLL RCVLYGVVDS GGRDRATAAV RAPQAAGCCA 60 VAASGDDVAG PRKQGTGGTT PPPAPQQQPP PPPPEQGLRC PRCDSPNTKF CYYNNYSLSQ 120 PRHFCKTCRR YWTKGGALRN VPVGGGCRKN KRSRSAASAS AAAVAAASSR LSLNLPVEGI 180 GGASADQQAA ARLGFLGGGA PLPVVSSPIG AASASDFHGG SAVGMMALPR FNAPAVGHYV 240 PFGEWPSAPG VDISCGGGSG NGGHAMSGGQ TGAVSSSIAS SIESLSFINQ DLHWKLQQQR 300 LATMFLGPPP SSGTTVHVEG AAAAPEHVGG PFLQMAGTST MEAVPAATSW FMDSSYVLPP 360 PPATIVTTTN GNVQSGRSSA DDDNATSNNN CGSAIPPASA SSSREGRSLP AANGIHGNEG 420 PVTDDSVCLP RVWFTGIPSA PRLASSLIAF YYSWLARSPR HGRRLPGAHV

Sequence ? help Back to Top

Protein Sequence Length: 470 aa Download sequence Send to blast

MSALDGDHRL QSARRPSNRG GESTAGSWLL RCVLYGVVDS GGRDRATAAV RAPQAAGCCA  60
VAASGDDVAG PRKQGTGGTT PPPAPQQQPP PPPPEQGLRC PRCDSPNTKF CYYNNYSLSQ  120
PRHFCKTCRR YWTKGGALRN VPVGGGCRKN KRSRSAASAS AAAVAAASSR LSLNLPVEGI  180
GGASADQQAA ARLGFLGGGA PLPVVSSPIG AASASDFHGG SAVGMMALPR FNAPAVGHYV  240
PFGEWPSAPG VDISCGGGSG NGGHAMSGGQ TGAVSSSIAS SIESLSFINQ DLHWKLQQQR  300
LATMFLGPPP SSGTTVHVEG AAAAPEHVGG PFLQMAGTST MEAVPAATSW FMDSSYVLPP  360
PPATIVTTTN GNVQSGRSSA DDDNATSNNN CGSAIPPASA SSSREGRSLP AANGIHGNEG  420
PVTDDSVCLP RVWFTGIPSA PRLASSLIAF YYSWLARSPR HGRRLPGAHV

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004982507.1	1e-103	dof zinc finger protein DOF5.7
TrEMBL	A0A3L6SBJ5	1e-105	A0A3L6SBJ5_PANMI; Dof zinc finger protein DOF5.7-like
STRING	Si036311m	1e-102	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367