PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01980.1.g00120.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 451aa    MW: 48863.2 Da    PI: 10.2753
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01980.1.g00120.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-20270319255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ +l+g
  Zmw_sc01980.1.g00120.1.am.mk 270 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDQAAYRLRG 319
                                   59******9.**********955...5*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.76E-31269329No hitNo description
SuperFamilySSF541719.81E-23270329IPR016177DNA-binding domain
PROSITE profilePS5103223.354270327IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-32270329IPR001471AP2/ERF domain
SMARTSM003801.5E-35270333IPR001471AP2/ERF domain
PfamPF008471.4E-14271319IPR001471AP2/ERF domain
PRINTSPR003675.1E-11271282IPR001471AP2/ERF domain
PRINTSPR003675.1E-11293309IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    Send to blast
LFNLVRPLFS IPSHPPNASL PFQFSRGPSF PTPPPHLATS SFLHSTASSS LPPPNPDAAS  60
AQTLRLPAPC LAVFRRVAVG WPAHAFDVLP RPLLLVRVTQ TTRPSPAPQE HTHRTANNSV  120
PIETTPLSTW TRGGSAHTWL CLSGHLACSV FDLKAHRSPA VITPSGLVAR TSVPRTKLPA  180
SRSWLRSAIS KVITTPACAP APRFFPNPSP HQTIHQFPTR TPQYTTTERS EKPSSPNPFA  240
RPLTQLRPSE FLQFVEVNFS LRWSLSSSKL YRGVRQRHWG KWVAEIRLPR NRTRLWLGTF  300
DTAEEAALAY DQAAYRLRGD AARLNFPDNA ASRAPLEPAV DAKLQTICAT IAAASSSSKG  360
KGRVGAVPIN MAPQAQPMSP SRSSSDEGSG SGSSDDDEAA SSAAAAVAAV APLAEMGQLD  420
FSEVPWDEAE SFVLRKYPSY EIDWDALLGS N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-202713271572Ethylene-responsive transcription factor ERF096
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38235203