PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01971.1.g00110.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

Dof

Protein Properties

Length: 480aa MW: 49346 Da PI: 6.5073

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01971.1.g00110.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	120.3	7.2e-38	45	101	4	60
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 + l+cprCdst+tkfCyynny+l qPr+fCk+CrryWt+GGalrnvPvGgg+rk + Zmw_sc01971.1.g00110.1.am.mk 45 AGLPCPRCDSTDTKFCYYNNYNLGQPRHFCKGCRRYWTRGGALRNVPVGGGTRKATA 101 6789**************************************************865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50884	28.956	47	101	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	9.0E-32	47	100	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	49	85	IPR003851	Zinc finger, Dof-type
ProDom	PD007478	2.0E-22	49	95	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence Send to blast
MVHRSGGAAA AMQAGHQAAE RNALALVAAA AAAAGGGGGG PKEPAGLPCP RCDSTDTKFC 60 YYNNYNLGQP RHFCKGCRRY WTRGGALRNV PVGGGTRKAT AAAARRKRAS SSSASTASAT 120 ALLVSSSPVP LSVSAPAYAT TVLPYDLPSF MPALRTSPLA AVEPDRRLLD LGGSFTSLLA 180 PAPDVRFSTG FLVGGLPPVM PPPASSAPAL LLPPPHPPVS QALAPEGFIW SMGCNGSGDP 240 VLPYRRSSAS LELGSSCCGH GAPARLVGIA GHAVTIFQSK GDHAPLTEDE PAAPVQSAEA 300 KPDDWATWSE ELPRNDADKN PFLYDGGSAV TQAPAVQTMP ALDDATAVPG GSGFDTNRIP 360 ASVFQPRTSV SQADWSMMSN ESLFSLHGSR QSVDGLYAGS RSHFDYFYDE AVAEQDSKLP 420 PLEEGAEAGD SVDAREFTVK GSGGAHASAG SVGAKKAAVF PRNESGSSGG SENFSFAFPM

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence Send to blast

MVHRSGGAAA AMQAGHQAAE RNALALVAAA AAAAGGGGGG PKEPAGLPCP RCDSTDTKFC  60
YYNNYNLGQP RHFCKGCRRY WTRGGALRNV PVGGGTRKAT AAAARRKRAS SSSASTASAT  120
ALLVSSSPVP LSVSAPAYAT TVLPYDLPSF MPALRTSPLA AVEPDRRLLD LGGSFTSLLA  180
PAPDVRFSTG FLVGGLPPVM PPPASSAPAL LLPPPHPPVS QALAPEGFIW SMGCNGSGDP  240
VLPYRRSSAS LELGSSCCGH GAPARLVGIA GHAVTIFQSK GDHAPLTEDE PAAPVQSAEA  300
KPDDWATWSE ELPRNDADKN PFLYDGGSAV TQAPAVQTMP ALDDATAVPG GSGFDTNRIP  360
ASVFQPRTSV SQADWSMMSN ESLFSLHGSR QSVDGLYAGS RSHFDYFYDE AVAEQDSKLP  420
PLEEGAEAGD SVDAREFTVK GSGGAHASAG SVGAKKAAVF PRNESGSSGG SENFSFAFPM