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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01933.1.g00080.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 367aa MW: 40408.6 Da PI: 6.9398 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01933.1.g00080.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57.7 | 2.7e-18 | 55 | 102 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl
Zmw_sc01933.1.g00080.1.am.mk 55 KGPWTLEEDQKLMDYIQKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 102
79********************************************97 PP
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2 | Myb_DNA-binding | 55.3 | 1.5e-17 | 108 | 153 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+eE+e +++++ G++ W++Ia++++ gRt++++k++w+++l
Zmw_sc01933.1.g00080.1.am.mk 108 RGKFTQEEEETILRLHSAIGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 153
89********************.*********.************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MCSGDQPSKL SSRKFSGSQG EAACLPPSQL HHSTPVLSHL SMGRAPCCDE NGLKKGPWTL 60 EEDQKLMDYI QKHGHGSWRA LPKLAGLNRC GKSCRLRWTN YLRPDIKRGK FTQEEEETIL 120 RLHSAIGNKW SAIAKHLPGR TDNEIKNFWN THLKKKLIQM GFDPMTHRPR TDFFAALPQL 180 IALANLRQLV EQRPWDDHTA RLQAEAAQAA KLQYLQSLLQ SAASIATSPS SSSMNTIPGD 240 LDQIGLLSPQ QMSSLSSLPS PSLLESISGQ DIVAGQVPDI QMPSSYFELP VSNDANKNTE 300 HTAKGIVEGD HSTSKTLLMS ENSLPPLADF PISNLGDACS TSSCGGYNTQ FPGWPELFDE 360 QFLSEFA
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |