PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01866.1.g00120.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

bZIP

Protein Properties

Length: 462aa MW: 51654.8 Da PI: 6.7205

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01866.1.g00120.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.8	2.7e-09	168	190	3	25
XXCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKk 25 ++k err+++NReAAr+sR+RKk Zmw_sc01866.1.g00120.1.sm.mkhc 168 DDKTERRLAQNREAARKSRLRKK 190 589*******************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	7.1E-7	168	236	No hit	No description
PROSITE pattern	PS00036	0	173	188	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.4E-29	224	299	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence Send to blast
MDPFSLHPYR HTSDLHFQEL QPSDTACFGE LEKALVHGTR DTSMIGSDVH AKAAGYLAAR 60 PPPTLEIFPS WPMSHLQQQY SGNSQSVGSS SGSSSGQNTM PQAELVSPWS TRADSGHQHE 120 ALMVSVDDYN YGQGFGATAA TAPIFQQHTA GQDKRRHEST RKDGKLLDDK TERRLAQNRE 180 AARKSRLRKK GLFLGGCSGT GDMSSGAIMF DMEYARWLDD ESKHLTELQG ALQAQLIDAN 240 LGVIVEDCMR HYDELFHLRA VLARSDVFHL MTGMWATTAE RCFLWMGGFR PSEILKMLIP 300 QLDPLTEQQL LGMCNLRQSS EQTEEALVQG LQQLHQSLAD AVGAGPLDDG ASLTNYTGLM 360 ALALDKLDSL ESFYRQADNL RQQALHHMRR ILTTRQTARC FLSIGEYHRR LRALSSAWTS 420 RPRENFVATE NVSPTGTDQA ILHHQHQHQQ QQHHNQSQFS GF

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence Send to blast

MDPFSLHPYR HTSDLHFQEL QPSDTACFGE LEKALVHGTR DTSMIGSDVH AKAAGYLAAR  60
PPPTLEIFPS WPMSHLQQQY SGNSQSVGSS SGSSSGQNTM PQAELVSPWS TRADSGHQHE  120
ALMVSVDDYN YGQGFGATAA TAPIFQQHTA GQDKRRHEST RKDGKLLDDK TERRLAQNRE  180
AARKSRLRKK GLFLGGCSGT GDMSSGAIMF DMEYARWLDD ESKHLTELQG ALQAQLIDAN  240
LGVIVEDCMR HYDELFHLRA VLARSDVFHL MTGMWATTAE RCFLWMGGFR PSEILKMLIP  300
QLDPLTEQQL LGMCNLRQSS EQTEEALVQG LQQLHQSLAD AVGAGPLDDG ASLTNYTGLM  360
ALALDKLDSL ESFYRQADNL RQQALHHMRR ILTTRQTARC FLSIGEYHRR LRALSSAWTS  420
RPRENFVATE NVSPTGTDQA ILHHQHQHQQ QQHHNQSQFS GF

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004961926.1	0.0	transcription factor TGAL5 isoform X1
Refseq	XP_022680634.1	0.0	transcription factor TGAL5 isoform X1
Swissprot	Q6F2N0	0.0	TGAL5_ORYSJ; Transcription factor TGAL5
TrEMBL	A0A368QHY5	0.0	A0A368QHY5_SETIT; Uncharacterized protein
STRING	OMERI05G15000.1	0.0	(Oryza meridionalis)
STRING	OS05T0443900-01	0.0	(Oryza sativa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3809	31	66

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Cheng CH, et al. A fine physical map of the rice chromosome 5. Mol. Genet. Genomics, 2005. 274(4): p. 337-45 [PMID:16261349] Chern M, et al. Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins. BMC Genomics, 2014. 15: p. 461 [PMID:24919709]