PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01855.1.g00150.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

C2H2

Protein Properties

Length: 299aa MW: 31466.7 Da PI: 9.9506

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01855.1.g00150.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.1	0.00014	209	231	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp Cg++F++ + L H+ +H Zmw_sc01855.1.g00150.1.am.mk 209 HKCPVCGEVFPSGMALGGHMGKH 231 79**************9999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13912	4.4E-9	209	233	IPR007087	Zinc finger, C2H2
PROSITE profile	PS50157	8.642	209	236	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	211	231	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence Send to blast
MTEALGKAKR SAGSELTAPA ATAQLKRPGR ALQNCDHCNR SIVVRVPPSV GNRSSALQTL 60 QVEALARCNH DRKTLPPVTH GPPLATVTAA RSATLAALPS AWTRPRASSS PNPVVTPVAF 120 AESNPSPASS VESSSPQTEF KPSNMAFVHQ QQPPEAVDHE HQPALAAPPA QGPDPPQGKY 180 VFRICVRRPH IGRPQLPAAE SRGTRGEEHK CPVCGEVFPS GMALGGHMGK HRDRPQTEGK 240 KQRVEPPPPA PVAPPAPPAS PAAGTMADEG IQTGQSPEVK GIRLFGVYMI PHVPSDPPP