PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01828.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | WRKY | ||||||||
Protein Properties | Length: 279aa MW: 30810.5 Da PI: 5.3402 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 57.6 | 2.5e-18 | 239 | 277 | 1 | 38 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEE CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkv 38 ++Dg++WrKYGqK kg+++pr+YYrCt a gCpv+k++ Zmw_sc01828.1.g00070.1.sm.mkhc 239 MNDGCQWRKYGQKISKGNPCPRAYYRCTVAaGCPVRKQM 277 58***************************99******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-18 | 224 | 277 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.48E-16 | 232 | 277 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 19.451 | 234 | 279 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.8E-9 | 239 | 279 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.5E-15 | 240 | 277 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence Send to blast |
MSKGEEQLGS HDEQLKDEVC SLGGRDNSEM ELASNRTPSN VKAQNKVVQE DKLASTRAEM 60 DEVREENERL KKMLSRIAED YRSLQMHFQE VIQQEQAKKP VDPMATSRTN NEEPGFISLS 120 LRTSTSMNKK EEKSSIVLEG KGREELTTIK ESGLSLGLTD CKVGAANSGK IQPNVLTLSP 180 EGSSEDATDD GIETTDQWPP SKTQNLRSDG AEVEDDLGPL PPVKKARVSV RARCDAPTMN 240 DGCQWRKYGQ KISKGNPCPR AYYRCTVAAG CPVRKQMAC |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025811456.1 | 1e-130 | probable WRKY transcription factor 72 | ||||
Swissprot | A0A3Q7GFB5 | 2e-59 | WK72A_SOLLC; WRKY transcription factor 72A | ||||
TrEMBL | A0A2S3HLX2 | 1e-129 | A0A2S3HLX2_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Da02223.1.p | 1e-119 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP5047 | 38 | 62 |
Publications ? help Back to Top | |||
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