PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01811.1.g00080.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family Trihelix
Protein Properties Length: 450aa    MW: 48074.3 Da    PI: 11.0185
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01811.1.g00080.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix67.82.2e-21193282186
                      trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtses 75 
                                   +Wt++e+laLiea+r+++e lr+g+l++++W++v++++        +   ++ +qC++k+e+l+kry++++ ++ +r+++ 
  Zmw_sc01811.1.g00080.1.am.mk 193 CWTHEETLALIEAYRDRWEMLRKGNLRAADWDDVADAVtsrcgrFPTATPKTGVQCRHKIEKLRKRYRAERGRSAGRSKG- 272
                                   8*************************************998888888899*************************98443. PP

                      trihelix  76 sstcpyfdqle 86 
                                     ++p+++ l+
  Zmw_sc01811.1.g00080.1.am.mk 273 -PKWPFYQLLH 282
                                   .47****9887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-21192283No hitNo description
PROSITE profilePS500906.017194256IPR017877Myb-like domain
SMARTSM005951.4E-5201289IPR006578MADF domain
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    Send to blast
LLPPAAGFPI RRKKSGRGRP RPTGEKARRG GHHHPPRPDT ALGHRGTDSA QCGAASSSSL  60
PSAAALRLHD KPLGGTTAPP PHAAAQRWCR SPAGHFTARP TPAAHHRTAP PLPPPPPPYY  120
DRFRSSSVPH LHHQTLDAFA AADRPSRDDA VSSPDLPPLA APVAAAAAAA AAAASSGGGG  180
LGAGSGRRLP PPCWTHEETL ALIEAYRDRW EMLRKGNLRA ADWDDVADAV TSRCGRFPTA  240
TPKTGVQCRH KIEKLRKRYR AERGRSAGRS KGPKWPFYQL LHDLAGNGAP DPSPNAIVKI  300
KTKGPAPPAS PPSPVSSPSS EEEAVRSRSL HGLISNGGAG SGLRFTIPKA SRTRPSSAAA  360
TRPDKSSNQG DTESEAMSEV AAALRAVGEG FVRMEERRLV LSIQMEKERM EFEMKRTQTM  420
LDAQQLFLEA FLGKQHLPHK KARVSPAMED
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008659928.11e-153trihelix transcription factor ASIL1
TrEMBLA0A1X7YE921e-151A0A1X7YE92_MAIZE; Uncharacterized protein
TrEMBLA0A3L6DCX41e-151A0A3L6DCX4_MAIZE; Trihelix transcription factor ASIL2
STRINGGRMZM2G428470_P011e-152(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP56893250