PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01771.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | GeBP | ||||||||
Protein Properties | Length: 256aa MW: 28400.2 Da PI: 9.8625 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 38.8 | 2.6e-12 | 32 | 117 | 6 | 97 |
DUF573 6 lwseeDeivlLqGlidfkaktgkspsddidafyefvkksis.fkvsksqlveKirrLKkKfkkkvkkaksgkepsfske 83 ws++D i +L +l +++g ++ + v++s++ + s s+l eK+rrLK++++k v+k + s++ Zmw_sc01771.1.g00070.1.es.mkhc 32 AWSNKDSIKILEALAAHVQSEGR--LPKTNFLLAAVHDSLDrKDCSYSDLYEKVRRLKERYEKTVSK-----GVLPSEK 103 6****************999995..56788999999999972579**********************.....3444566 PP DUF573 84 hdqkifelskkiWg 97 ++ ++++lsk iWg Zmw_sc01771.1.g00070.1.es.mkhc 104 DELQMYHLSKAIWG 117 6779*********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.7E-17 | 32 | 117 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
KAKKPGGKPE KSGLDSTQPL SKSEKSARAP CAWSNKDSIK ILEALAAHVQ SEGRLPKTNF 60 LLAAVHDSLD RKDCSYSDLY EKVRRLKERY EKTVSKGVLP SEKDELQMYH LSKAIWGDKA 120 KGAIAASATQ NVSTATKSNK GQDNKEKMDG SSRGGTSKDA THKEEAEIGA RMLQGMRRSS 180 DELQNLYPSL AWSVETMVLQ HPCGETLKRG FEFIDDQKAN SFESKIEKQR ISEVKVQLRR 240 ADISKEVLKM LNASAD |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003571636.1 | 1e-61 | hepatoma-derived growth factor-related protein 2 | ||||
TrEMBL | I1I2T6 | 3e-60 | I1I2T6_BRADI; Uncharacterized protein | ||||
STRING | BRADI3G20610.1 | 5e-61 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7289 | 27 | 37 |