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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Zmw_sc01769.1.g00100.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
|
| Family |
WOX |
| Protein Properties |
Length: 263aa MW: 30320.1 Da PI: 8.7037 |
| Description |
WOX family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Zmw_sc01769.1.g00100.1 | genome | ZGD | - |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 63.3 | 3.6e-20 | 70 | 131 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
++ R+++t+eq+++L elF+ r+ps+e++++++++l +++ ++V++WFqN++a+e++
Zmw_sc01769.1.g00100.1.am.mk 70 KCGRWNPTAEQVKVLTELFRAgLRTPSTEQIQRISTHLsafgKVESKNVFYWFQNHKARERH 131
568*****************99**************************************95 PP
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| 2 | Wus_type_Homeobox | 110.2 | 1.2e-35 | 71 | 132 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
+ RW+Pt+eQ+k+L+el+++GlrtP++e+iqri+++L+++Gk+e+kNVfyWFQN+kaRer++
Zmw_sc01769.1.g00100.1.am.mk 71 CGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARERHH 132
78**********************************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 263 aa
Download sequence Send
to blast |
MSGAAHEIEQ RSCQQWLLSR MSPSSLDLTV RGNKRKAPSR DFRIRYCHCH CHCHDRGLGR 60
APCPGYISVK CGRWNPTAEQ VKVLTELFRA GLRTPSTEQI QRISTHLSAF GKVESKNVFY 120
WFQNHKARER HHHKKRRRGA SSPDSGSGSN EDDGRGASQE AEVDLVLQPP ESKREARSYS 180
HHHRFMTCYV RDVVEQQADE AFWERPTREV ETLELFPLKS YDLEAEKVRY VRSAAEQCRE 240
FSFFDVAAGR DPPLELRLCS FGL
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor which may be involved in the specification and maintenance of the stem cells (QC cells) in the root apical meristem (RAM). {ECO:0000269|PubMed:12904206}. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Li S, et al.
OsFIE2 plays an essential role in the regulation of rice vegetative and reproductive development.
New Phytol., 2014. 201(1): p. 66-79
[PMID:24020752] - Chu H, et al.
A CLE-WOX signalling module regulates root meristem maintenance and vascular tissue development in rice.
J. Exp. Bot., 2013. 64(17): p. 5359-69
[PMID:24043854] - Wang W, et al.
Dwarf Tiller1, a Wuschel-related homeobox transcription factor, is required for tiller growth in rice.
PLoS Genet., 2014. 10(3): p. e1004154
[PMID:24625559] - Coudert Y, et al.
Identification of CROWN ROOTLESS1-regulated genes in rice reveals specific and conserved elements of postembryonic root formation.
New Phytol., 2015. 206(1): p. 243-54
[PMID:25442012]
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