PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

Zmw_sc01748.1.g00050.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

G2-like

Protein Properties

Length: 301aa MW: 31887.8 Da PI: 7.3439

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01748.1.g00050.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	49.8	7.6e-16	144	173	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Zmw_sc01748.1.g00050.1.sm.mk 144 WATPKSVLELMDVKDLTLAHVKSHLQMYRT 173 59***************************7 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.60	1.5E-14	137	174	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	2.9E-12	140	173	IPR006447	Myb domain, plants
SuperFamily	SSF46689	3.05E-6	141	174	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence Send to blast
MEFFPSQPDL SLQIGLSTSA PPHDRHHHHH AAAALNARFF AAGGGAGNGG LVGSAGTMAP 60 SSLQLPGAMP MPLPLPLPVP MHPGAAGHQG GGLYYHPDGG AAVLRPIRGV PLYQHHPQHA 120 VAGPCFCEPC HVAGAWRRAG PLPWATPKSV LELMDVKDLT LAHVKSHLQM YRTVKNTERP 180 AASSDQADGF EKGAAGEICD DNSLDLQGAY SGGGGRPETA ARHGSYSSLR LVHREDWTGF 240 PSESSTGSIH SLKDRKMQSK SLEILSDMNS SCVSETTTSS TSVDLNLDFT LGRPHQTRRP 300 N

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008661896.1	3e-97	KANADI-like transcription factor FEATHERED isoform X1
TrEMBL	A0A3L6PS85	7e-99	A0A3L6PS85_PANMI; Putative transcription factor RL9 isoform X1
STRING	GRMZM2G123308_P02	8e-95	(Zea mays)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4721	36	65