PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01720.1.g00070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 396aa MW: 43639.1 Da PI: 7.6648 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 21.9 | 4.3e-07 | 156 | 204 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 +y+GV++ + +g+W++ I r + +g fgtae Aa a++++ +++ g Zmw_sc01720.1.g00070.1.am.mk 156 RYRGVTRLP-NGKWRSIIFN------RddYEYTIGDFGTAEAAALAHDRMILAILG 204 69*******.8****88544......346999****************99888766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 2.67E-11 | 156 | 217 | No hit | No description |
Pfam | PF00847 | 2.3E-4 | 156 | 202 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 13.182 | 156 | 215 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.33E-9 | 156 | 214 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 1.1E-4 | 156 | 221 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-9 | 156 | 215 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 396 aa Download sequence Send to blast |
MKPAVSGDVI DERQGRGRGR GGLFTQLGRG CASVPPSLGF SANLDPCARD DGTRDFFNLT 60 AEEELGTRKA ESPELWGALT VRCWGPPRAV LVRRLVSGGR HWRAAADVEE RRVPRLHARV 120 PKSTSTSPIA GSPPLHTRSG RSRTMATAVP TTEVLRYRGV TRLPNGKWRS IIFNRDDYEY 180 TIGDFGTAEA AALAHDRMIL AILGPDASAE VLNFRAAFSD TELRFLRGRH SPARCVAGVV 240 AMLRKGEYDA EFARFAEHAF DAYMDPELAQ DVASFRFAHN DALLRRKEAA VVAAAGANVD 300 PAARAKAERD AEREVFLDAV KNKANDEAWV KSYHRRRRQF GPTVEDENRW PPVVPAADVD 360 VDDWLPGEEL IYLPHGSSYV DEMILGDGLA KKEHGA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1E5UKQ2 | 1e-103 | A0A1E5UKQ2_9POAL; Uncharacterized protein | ||||
STRING | Sb01g022380.1 | 1e-103 | (Sorghum bicolor) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15058 | 17 | 18 |