PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zmw_sc01720.1.g00070.1
Organism
Zoysia matrella
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 396aa    MW: 43639.1 Da    PI: 7.6648
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zmw_sc01720.1.g00070.1genomeZGD-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP221.94.3e-07156204255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GV++ + +g+W++ I        r    + +g fgtae Aa a++++ +++ g
  Zmw_sc01720.1.g00070.1.am.mk 156 RYRGVTRLP-NGKWRSIIFN------RddYEYTIGDFGTAEAAALAHDRMILAILG 204
                                   69*******.8****88544......346999****************99888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.67E-11156217No hitNo description
PfamPF008472.3E-4156202IPR001471AP2/ERF domain
PROSITE profilePS5103213.182156215IPR001471AP2/ERF domain
SuperFamilySSF541713.33E-9156214IPR016177DNA-binding domain
SMARTSM003801.1E-4156221IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-9156215IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    Send to blast
MKPAVSGDVI DERQGRGRGR GGLFTQLGRG CASVPPSLGF SANLDPCARD DGTRDFFNLT  60
AEEELGTRKA ESPELWGALT VRCWGPPRAV LVRRLVSGGR HWRAAADVEE RRVPRLHARV  120
PKSTSTSPIA GSPPLHTRSG RSRTMATAVP TTEVLRYRGV TRLPNGKWRS IIFNRDDYEY  180
TIGDFGTAEA AALAHDRMIL AILGPDASAE VLNFRAAFSD TELRFLRGRH SPARCVAGVV  240
AMLRKGEYDA EFARFAEHAF DAYMDPELAQ DVASFRFAHN DALLRRKEAA VVAAAGANVD  300
PAARAKAERD AEREVFLDAV KNKANDEAWV KSYHRRRRQF GPTVEDENRW PPVVPAADVD  360
VDDWLPGEEL IYLPHGSSYV DEMILGDGLA KKEHGA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5UKQ21e-103A0A1E5UKQ2_9POAL; Uncharacterized protein
STRINGSb01g022380.11e-103(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP150581718