PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01694.1.g00150.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | DBB | ||||||||
Protein Properties | Length: 474aa MW: 50028.2 Da PI: 7.6105 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.1 | 1.2e-05 | 115 | 156 | 4 | 39 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e e++ C ++ lC+ C H H + Zmw_sc01694.1.g00150.1.am.mk 115 VLCSACEAAEARVLCCADKAALCARCDRDVHAAnrlagkHHR 156 57******99******************99955667777554 PP | |||||||
2 | zf-B_box | 18.9 | 3.1e-06 | 191 | 223 | 12 | 37 |
zf-B_box 12 ke.lqlfCedCqqllCedClleeHkg......H 37 ++ + +fC +++ llC++C ++ H H Zmw_sc01694.1.g00150.1.am.mk 191 EChAYFFCVEDRALLCRSCDVAVHTAnafvsaH 223 33499*****************99545566666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50119 | 10.495 | 112 | 159 | IPR000315 | B-box-type zinc finger |
SMART | SM00336 | 1.9E-9 | 112 | 159 | IPR000315 | B-box-type zinc finger |
CDD | cd00021 | 3.76E-7 | 115 | 159 | No hit | No description |
SMART | SM00336 | 2.0E-7 | 184 | 228 | IPR000315 | B-box-type zinc finger |
CDD | cd00021 | 3.82E-6 | 190 | 228 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0008270 | Molecular Function | zinc ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 474 aa Download sequence Send to blast |
MGSRDVASTC RSIPTPPARS TAVTSVSFPA FTPSIISRRC PLPRRSFFTS PPNRQSVTLT 60 AADLSWPAPS DKTAPLFPSY PLRQTAPPTT LLPPADHRSR ESVHGRARRI WSMKVLCSAC 120 EAAEARVLCC ADKAALCARC DRDVHAANRL AGKHHRLPLL APGAITAPNC DICQVPAASE 180 PLSPASAAPQ ECHAYFFCVE DRALLCRSCD VAVHTANAFV SAHRRFLLTG VQVGLQPDAQ 240 ETEQHTPTAS TAAAAASLQT PPPPPPAKKS SSPAPLYSDD DIDWAAGPDG GLSGNLPDWC 300 VVDEQFNAPV QKSVDPVATK PPAKRSPRGA IVSAYGGQGG VTGGMQAWPL DEFFGFSEFN 360 AGLGLTENST SKADSGKLGS TDGSPNGWSS SDIAQDFFGQ VPEVHHQWSV PELPSPPTAS 420 GLHLQGGPRH DRSATTDATA MSVPDISSPG NPFRCFAADT GQPLPAPPAK RRRY |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025819038.1 | 1e-155 | B-box zinc finger protein 22-like | ||||
TrEMBL | A0A0A9LRZ4 | 1e-170 | A0A0A9LRZ4_ARUDO; Uncharacterized protein | ||||
STRING | Pavir.Eb00238.1.p | 1e-165 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1794 | 33 | 82 |