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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Zmw_sc01694.1.g00080.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
M-type_MADS |
Protein Properties |
Length: 185aa MW: 20198.8 Da PI: 9.7753 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01694.1.g00080.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 100.5 | 6.6e-32 | 133 | 182 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
Zmw_sc01694.1.g00080.1.am.mk 133 KRIENSTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 182
79***********************************************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 185 aa
Download sequence Send
to blast |
MDQEVDDRGD VRKNVRSINA SVSGPGQRWR RPGDRVVEEV LVGKGERDAF ASIRDHHLSH 60 PASSSCAYPL SLSGSHSSPA PKEAHSIPPT MLNMMSDLSC GPSAKGKEQP APANSGPSAG 120 MSEKLGRGKI EIKRIENSTN RQVTFCKRRN GLLKKAYELS VLCDAEVALI VFSSRGRLYE 180 YANHR
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1tqe_P | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
1tqe_Q | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
1tqe_R | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
1tqe_S | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
5f28_A | 4e-21 | 125 | 182 | 1 | 58 | MEF2C |
5f28_B | 4e-21 | 125 | 182 | 1 | 58 | MEF2C |
5f28_C | 4e-21 | 125 | 182 | 1 | 58 | MEF2C |
5f28_D | 4e-21 | 125 | 182 | 1 | 58 | MEF2C |
6c9l_A | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
6c9l_B | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
6c9l_C | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
6c9l_D | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
6c9l_E | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
6c9l_F | 4e-21 | 125 | 182 | 1 | 58 | Myocyte-specific enhancer factor 2B |
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