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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01693.1.g00250.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 358aa MW: 39126.9 Da PI: 6.5015 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01693.1.g00250.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 51.1 | 3e-16 | 31 | 80 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd lv+ ++++Gg+ +W+ ++ g++R++k+c++rw +yl
Zmw_sc01693.1.g00250.1.am.mkhc 31 KGPWTEEEDRTLVEHIQKHGGHvsSWRNLPKAAGLNRCGKSCRLRWTNYL 80
79**********************************************97 PP
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2 | Myb_DNA-binding | 54.8 | 2.1e-17 | 86 | 130 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg++T +E+ l++ ++++lG++ W+tIa ++ gRt++++k++w+++
Zmw_sc01693.1.g00250.1.am.mkhc 86 RGNFTDDEERLIIALHAELGNK-WSTIATHLE-GRTDNEIKNYWNTH 130
89********************.*********.************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 358 aa
Download sequence Send
to blast |
SPSREKRACR KTSIESMGRS PCCCHDAGVK KGPWTEEEDR TLVEHIQKHG GHVSSWRNLP 60 KAAGLNRCGK SCRLRWTNYL RPDIKRGNFT DDEERLIIAL HAELGNKWST IATHLEGRTD 120 NEIKNYWNTH IRKKLVRMGV DPVTHQRLPP DDILNGALAS PGGLPGTLLC AAASSFRDLD 180 TALRQAQALQ LLLQVVGSSS NLTGSAALLG NYNLPTGNAM LSNVNNSVAP NLQDQMMSIF 240 SPANNRPAAG YYPPCDAGAA NFAEQGMAQQ CLKSSAPSPS CGSPNGELAA DQYCNTTAAL 300 ERPAAYTQEA AATGVDLPAP VQTFTDLLEP REMPNMYSLE EDDRLWDWDD MLHSSFHL
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that acts as negative regulator of lateral root (LR) development. Required for normal auxin responses during LR development. May be part of a negative feedback loop stimulated specifically in the endodermis upon LR initiation to ensure that LRs are formed only in the correct place. {ECO:0000269|PubMed:24902892}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA), auxin and gravity in roots. {ECO:0000269|PubMed:24902892}. |