PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Zmw_sc01688.1.g00030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family | ERF | ||||||||
Protein Properties | Length: 328aa MW: 35050.4 Da PI: 4.4431 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.7e-18 | 95 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + r++lg++ +ae Aa+a++aa++ ++g Zmw_sc01688.1.g00030.1.sm.mk 95 QYRGVRRRP-WGKWAAEIRDPV----KgVRVWLGTYSSAEAAARAYDAAARDIRG 144 69*******.**********75....44**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.69E-18 | 94 | 154 | No hit | No description |
SuperFamily | SSF54171 | 4.71E-22 | 95 | 153 | IPR016177 | DNA-binding domain |
Pfam | PF00847 | 5.3E-12 | 95 | 144 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.2E-31 | 95 | 153 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 24.698 | 95 | 152 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.2E-37 | 95 | 158 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-10 | 96 | 107 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-10 | 118 | 134 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
MCGGAILAEL IPSAPARLHK PGHLWPAAAT TSNDKRQRRK ADDFEAAFRD FDDDNSKDDA 60 EMAEAEEVAE SKPFVFRAAP SANGHGGGRR KPPAQYRGVR RRPWGKWAAE IRDPVKGVRV 120 WLGTYSSAEA AARAYDAAAR DIRGSRAKLN FPETFSSASD SAPAGRKRAR AVPAAPVIDL 180 VFDEVEEDHA ASVKHEAEAS QSSDDSGHAL LPDFSWQGMS ALDFAVAQPA LDVEPAGAGK 240 RMRTEETPAE RAGDEEASPA SSESDALFDA FLFCDQYPFF GGGGGGAYES LDSLFSADAV 300 QGGSAADEGM GLWSFDDDCL LVEDNLSF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2gcc_A | 1e-19 | 95 | 157 | 5 | 68 | ATERF1 |
3gcc_A | 1e-19 | 95 | 157 | 5 | 68 | ATERF1 |
5wx9_A | 1e-19 | 94 | 159 | 13 | 79 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 170 | GRKRARA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025797880.1 | 1e-101 | ethylene-responsive transcription factor ERF073-like | ||||
TrEMBL | A0A2T7CGR1 | 1e-100 | A0A2T7CGR1_9POAL; Uncharacterized protein | ||||
STRING | Si036118m | 8e-89 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4371 | 26 | 54 |