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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01679.1.g00200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
NAC |
Protein Properties |
Length: 225aa MW: 24788.7 Da PI: 5.7383 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01679.1.g00200.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 100 | 3.3e-31 | 30 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk 79
lppGf+F P+deelvv++L++k++ ++++ + v++ev ++ +Pw+L+ k+ + ++wyfFs++ ++r+t
Zmw_sc01679.1.g00200.1.am.mkhc 30 LPPGFHFFPSDEELVVHFLRRKASLHPCQPDVVVPEVLPNQQDPWELDGKALQAGNQWYFFSHAT--------QSRVTP 100
79*************************999778**************966667789******975........5799** PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkge.ktdWvmheyrl 128
+gyW+ d+ v s +g +vg+k+tLvf gr g+ +t+Wvmhey+l
Zmw_sc01679.1.g00200.1.am.mkhc 101 NGYWNPVCDDEMVSS-GGGNVGIKRTLVFSLGRPCGGThETNWVMHEYHL 149
*********999999.9999**********9999887648********98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 225 aa
Download sequence Send
to blast |
MSDSRLPPAS SPSTSSSFAP HLAMVGPSDL PPGFHFFPSD EELVVHFLRR KASLHPCQPD 60 VVVPEVLPNQ QDPWELDGKA LQAGNQWYFF SHATQSRVTP NGYWNPVCDD EMVSSGGGNV 120 GIKRTLVFSL GRPCGGTHET NWVMHEYHLL DGSCKGSGGT SSSSKRLHKK KSHSKIECNN 180 WVICRVFDSS CGSQVSFQDE GMELSCLDEV FLSLDDYDEV SLPNK
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
3swm_A | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swm_B | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swm_C | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swm_D | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swp_A | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swp_B | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swp_C | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
3swp_D | 2e-31 | 30 | 194 | 20 | 173 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that influences tracheary elements and xylem development by negatively regulating secondary cell wall fiber synthesis and programmed cell death. {ECO:0000269|PubMed:18069942, ECO:0000269|PubMed:20458494}. |