PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Zmw_sc01675.1.g00020.1

Organism

Zoysia matrella

Taxonomic ID

38722

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia

Family

ERF

Protein Properties

Length: 676aa MW: 71581 Da PI: 8.8254

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Zmw_sc01675.1.g00020.1	genome	ZGD	-

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	26.2	2e-08	504	531	28	55
AP2 28 rkrfslgkfgtaeeAakaaiaarkkleg 55 ++r++lg+f tae+Aa+a+++a++ + g Zmw_sc01675.1.g00020.1.am.mk 504 KTRIWLGTFETAEDAARAYDEAARIMCG 531 48*********************98765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51032	13.05	462	539	IPR001471	AP2/ERF domain
SMART	SM00380	1.1E-14	497	545	IPR001471	AP2/ERF domain
Gene3D	G3DSA:3.30.730.10	8.9E-19	497	540	IPR001471	AP2/ERF domain
CDD	cd00018	5.19E-16	499	539	No hit	No description
SuperFamily	SSF54171	1.37E-11	500	540	IPR016177	DNA-binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence Send to blast
MVRASDLHVK EGEESQVGTI VAAERKKRRR RDNPSCVKRH TSGRCGLYSG HSAQLDRPPN 60 SKLQTPNRVM EKPWTALLRS KGFMHLAQCV AAVVVVVIVT LRTSLSWRAE IIPRSHGGFR 120 VLSGVPPSLP AFAGGPFART CRGQGVDDHG ACLQASVYAV TDESLPGSVF QCDPEIPEWY 180 KPNEPSLPYL GAADLKTEGD ESPRPGLFHL FKEAARQKWV LPAPALTQLD VAPTTVCAAL 240 GMASASIRSA LGRSYPTLIQ AWAPRRIACD DEDDKCVACS AAHARSHRTH AHQSLSSQDW 300 TTTCVAPVMS AHGSSSLRVE GVALLPKAAL EVGAPVGNVT AEASPPWPRL HPEARRHMCR 360 VALGPGRLAY GTFVDRAPDV GAVDAACVPS VVKPGDSTLP AGAFPRHVTR WCDRISDDSV 420 ERARALVSGA RQPSRSRARS QEAEVSSVAG RVQITGAASR SIAVGVPDNG AGAATVPRRA 480 AAPLGLLGLR DPPPPPVRRQ AATKTRIWLG TFETAEDAAR AYDEAARIMC GPRARTNFPS 540 DAAASAAAAS SSSSFLSAAL VEKLHRFNLA SVQVAQXXXX NFPSDAAASA AAASSSSSFL 600 SAALVEKLHR FNLASVQVAQ RQREAAAAAA ASASAAATAP SPSAVQWGGG TFLEEQHVEQ 660 MIEELLDSNF SMEICY

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence Send to blast

MVRASDLHVK EGEESQVGTI VAAERKKRRR RDNPSCVKRH TSGRCGLYSG HSAQLDRPPN  60
SKLQTPNRVM EKPWTALLRS KGFMHLAQCV AAVVVVVIVT LRTSLSWRAE IIPRSHGGFR  120
VLSGVPPSLP AFAGGPFART CRGQGVDDHG ACLQASVYAV TDESLPGSVF QCDPEIPEWY  180
KPNEPSLPYL GAADLKTEGD ESPRPGLFHL FKEAARQKWV LPAPALTQLD VAPTTVCAAL  240
GMASASIRSA LGRSYPTLIQ AWAPRRIACD DEDDKCVACS AAHARSHRTH AHQSLSSQDW  300
TTTCVAPVMS AHGSSSLRVE GVALLPKAAL EVGAPVGNVT AEASPPWPRL HPEARRHMCR  360
VALGPGRLAY GTFVDRAPDV GAVDAACVPS VVKPGDSTLP AGAFPRHVTR WCDRISDDSV  420
ERARALVSGA RQPSRSRARS QEAEVSSVAG RVQITGAASR SIAVGVPDNG AGAATVPRRA  480
AAPLGLLGLR DPPPPPVRRQ AATKTRIWLG TFETAEDAAR AYDEAARIMC GPRARTNFPS  540
DAAASAAAAS SSSSFLSAAL VEKLHRFNLA SVQVAQXXXX NFPSDAAASA AAASSSSSFL  600
SAALVEKLHR FNLASVQVAQ RQREAAAAAA ASASAAATAP SPSAVQWGGG TFLEEQHVEQ  660
MIEELLDSNF SMEICY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	24	30	RKKRRRR
2	24	31	RKKRRRRD
3	25	30	KKRRRR

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP28464	2	2