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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Zmw_sc01662.1.g00060.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
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Family |
MYB |
Protein Properties |
Length: 292aa MW: 32701.3 Da PI: 6.3109 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Zmw_sc01662.1.g00060.1 | genome | ZGD | - |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 57 | 4.6e-18 | 35 | 82 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT +Ed+ lv++++++G g+W++ ar g++Rt+k+c++rw++yl
Zmw_sc01662.1.g00060.1.am.mkhc 35 RGPWTVDEDLTLVNYIAEHGDGRWNALARAAGLKRTGKSCRLRWLNYL 82
89********************************************97 PP
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2 | Myb_DNA-binding | 52.2 | 1.4e-16 | 88 | 131 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg +T++E++l++d++ ++G++ W++Ia+ ++ gRt++++k++w++
Zmw_sc01662.1.g00060.1.am.mkhc 88 RGDFTADEQLLILDLHSRWGNR-WSKIAQQLP-GRTDNEIKNYWRT 131
899*******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MEMALQQRGS SSSRPSSATQ PTAMKKEQEE EELRRGPWTV DEDLTLVNYI AEHGDGRWNA 60 LARAAGLKRT GKSCRLRWLN YLRPDVKRGD FTADEQLLIL DLHSRWGNRW SKIAQQLPGR 120 TDNEIKNYWR TRVQKHARQL NCDVNSRRFK EAMIYLAQRA AAASQCNSQS QQHPVFLAGG 180 DSSNVANKSS ASSCDLSAVL TTAATPPPAA CSSSSDSSLT STESAHEEKS VLHLPNDGGC 240 WPTMQSANHE FWELQELNVD MPDLTGWVQG FSEGIPDADH SLWSLEDIWR MQ
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that may be involved in the jasmonate-dependent defense responses to the rice blast fungus Magnaporthe oryzae. Does not seem to function in the salicylic acid-dependent signaling pathway. {ECO:0000269|PubMed:11310740}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by jasmonate (JA), wounding and infection by the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:11310740}. |
Publications
? help Back to Top |
- Ahn IP,Kim S,Kang S,Suh SC,Lee YH
Rice Defense Mechanisms Against Cochliobolus miyabeanus and Magnaporthe grisea Are Distinct. Phytopathology, 2005. 95(11): p. 1248-55 [PMID:18943354] - Campos-Soriano L,García-Martínez J,San Segundo B
The arbuscular mycorrhizal symbiosis promotes the systemic induction of regulatory defence-related genes in rice leaves and confers resistance to pathogen infection. Mol. Plant Pathol., 2012. 13(6): p. 579-92 [PMID:22212404] - Yokotani N, et al.
Role of the rice transcription factor JAmyb in abiotic stress response. J. Plant Res., 2013. 126(1): p. 131-9 [PMID:22847900] - Wang D, et al.
Expression analysis of innate immunity related genes in the true/field blast resistance gene-mediated defence response. Biotechnol. Biotechnol. Equip., 2014. 28(6): p. 999-1007 [PMID:26740780] - Fred AK,Kiswara G,Yi G,Kim KM
Screening Rice Cultivars for Resistance to Bacterial Leaf Blight. J. Microbiol. Biotechnol., 2016. 26(5): p. 938-45 [PMID:26869604]
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